RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 NUP85Q9BW27 656 aa17.85■□□□□ 0.45
CTSA-207ENST00000484855 TRIM6Q9C030 488 aaPredicted RBP17.85■□□□□ 0.45
CTSA-207ENST00000484855 SNTG2Q9NY99 539 aa17.85■□□□□ 0.45
CTSA-207ENST00000484855 CNOT8Q9UFF9 292 aaKnown RBP17.85■□□□□ 0.45
CTSA-207ENST00000484855 CHORDC1Q9UHD1 332 aaPredicted RBP17.85■□□□□ 0.45
CTSA-207ENST00000484855 PIN4Q9Y237 131 aaKnown RBP17.85■□□□□ 0.45
CTSA-207ENST00000484855 ATICP31939 592 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 CRYBB1P53674 252 aaPredicted RBP17.84■□□□□ 0.45
CTSA-207ENST00000484855 PASD1Q8IV76 773 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 CXorf38Q8TB03 319 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 CYFIP2Q96F07 1278 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 TRIM11Q96F44 468 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 XPNPEP3Q9NQH7 507 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 UVRAGQ9P2Y5 699 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 GTF2IRD1Q9UHL9 959 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 ITGA11Q9UKX5 1188 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 ELNP15502 786 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 POLR2BP30876 1174 aaKnown RBP17.84■□□□□ 0.45
CTSA-207ENST00000484855 GUCY2FP51841 1108 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 YARSP54577 528 aaKnown RBP17.84■□□□□ 0.45
CTSA-207ENST00000484855 NBPF20Q3BBV1 942 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 WDR72Q3MJ13 1102 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 ZNF394Q53GI3 561 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 SMYD5Q6GMV2 418 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 FAXDC2Q96IV6 333 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 PNKPQ96T60 521 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 SELENOOQ9BVL4 669 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 PLEKHA5Q9HAU0 1116 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 CREBZFQ9NS37 354 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 RNF186Q9NXI6 227 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 DPP3Q9NY33 737 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 THSD7BQ9C0I4 1608 aa17.84■□□□□ 0.45
CTSA-207ENST00000484855 ADAMTS4O75173 837 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 CFHP08603 1231 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 MYBL1P10243 752 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 PRKAR2AP13861 404 aaKnown RBP17.83■□□□□ 0.45
CTSA-207ENST00000484855 CCND3P30281 292 aaPredicted RBP17.83■□□□□ 0.45
CTSA-207ENST00000484855 SSTR3P32745 418 aaPredicted RBP17.83■□□□□ 0.45
CTSA-207ENST00000484855 RAP1GAPP47736 663 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 NOMO3P69849 1222 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 NKX3-2P78367 333 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 MCOLN2Q8IZK6 566 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 MMGT1Q8N4V1 131 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 ZNF606Q8WXB4 792 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 SNX27Q96L92 541 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 BCO2Q9BYV7 579 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 AGAP1Q9UPQ3 857 aa17.83■□□□□ 0.45
CTSA-207ENST00000484855 TMEM110-MUSTN1A8MSY1 372 aa17.83■□□□□ 0.44
CTSA-207ENST00000484855 VRTNQ9H8Y1 702 aa17.83■□□□□ 0.44
CTSA-207ENST00000484855 DERAQ9Y315 318 aa17.83■□□□□ 0.44
CTSA-207ENST00000484855 ALG6Q9Y672 507 aa17.83■□□□□ 0.44
CTSA-207ENST00000484855 P4HA1P13674 534 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 BRD2P25440 801 aaKnown RBP17.82■□□□□ 0.44
CTSA-207ENST00000484855 RBP5P82980 135 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 MESDQ14696 234 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 FAM47CQ5HY64 1035 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 CCDC70Q6NSX1 233 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 PPP1R2P3Q6NXS1 205 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 TMCO3Q6UWJ1 677 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 MON1BQ7L1V2 547 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 HPDLQ96IR7 371 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 NXF3Q9H4D5 531 aaKnown RBP17.82■□□□□ 0.44
CTSA-207ENST00000484855 SMYD3Q9H7B4 428 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 AVENQ9NQS1 362 aaPredicted RBP17.82■□□□□ 0.44
CTSA-207ENST00000484855 RAB21Q9UL25 225 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 HES2Q9Y543 173 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 SCN1AP35498 2009 aa17.82■□□□□ 0.44
CTSA-207ENST00000484855 M0QZ92 97 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 CEP104O60308 925 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 MYCNP04198 464 aaPredicted RBP17.81■□□□□ 0.44
CTSA-207ENST00000484855 BRD3Q15059 726 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 GDF6Q6KF10 455 aaPredicted RBP17.81■□□□□ 0.44
CTSA-207ENST00000484855 CD99L2Q8TCZ2 262 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 CELF4Q9BZC1 486 aaKnown RBP17.81■□□□□ 0.44
CTSA-207ENST00000484855 RBM12Q9NTZ6 932 aaKnown RBP17.81■□□□□ 0.44
CTSA-207ENST00000484855 SRRDQ9UH36 339 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 CCDC151A5D8V7 595 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 DDX3YO15523 660 aaKnown RBP17.81■□□□□ 0.44
CTSA-207ENST00000484855 TRPA1O75762 1119 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 RECQL4O94761 1208 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 TUBBP07437 444 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 RNASE9P60153 205 aaKnown RBP17.81■□□□□ 0.44
CTSA-207ENST00000484855 MRPS6P82932 125 aaKnown RBP17.81■□□□□ 0.44
CTSA-207ENST00000484855 RSPH3Q86UC2 560 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 C11orf70Q9BRQ4 267 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 APOL6Q9BWW8 343 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 CFHR5Q9BXR6 569 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 SDCBP2Q9H190 292 aa17.81■□□□□ 0.44
CTSA-207ENST00000484855 STAU1O95793 577 aaKnown RBP17.8■□□□□ 0.44
CTSA-207ENST00000484855 ASGR1P07306 291 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 RRM1P23921 792 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 CDH8P55286 799 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 LIN9Q5TKA1 542 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 PHF13Q86YI8 300 aaPredicted RBP17.8■□□□□ 0.44
CTSA-207ENST00000484855 USP38Q8NB14 1042 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 ACTRT1Q8TDG2 376 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 BTBD6Q96KE9 485 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 ZMAT2Q96NC0 199 aaKnown RBP17.8■□□□□ 0.44
CTSA-207ENST00000484855 CXCL16Q9H2A7 254 aa17.8■□□□□ 0.44
CTSA-207ENST00000484855 CYP3A43Q9HB55 503 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms