RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 USP18Q9UMW8 372 aa17.17■□□□□ 0.34
CDPF1-206ENST00000475605 RBM19Q9Y4C8 960 aaKnown RBP17.17■□□□□ 0.34
CDPF1-206ENST00000475605 TIMM13Q9Y5L4 95 aaPredicted RBP17.17■□□□□ 0.34
CDPF1-206ENST00000475605 PIAS3Q9Y6X2 628 aa17.17■□□□□ 0.34
CDPF1-206ENST00000475605 PDCD11Q14690 1871 aaKnown RBP17.16■□□□□ 0.34
CDPF1-206ENST00000475605 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
CDPF1-206ENST00000475605 OR4Q2P0C623 313 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 PDCP20941 246 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 EPHA5P54756 1037 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 CUL4AQ13619 759 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 GAS6Q14393 721 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 LARP1BQ659C4 914 aaKnown RBP17.16■□□□□ 0.34
CDPF1-206ENST00000475605 APPL2Q8NEU8 664 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 SHKBP1Q8TBC3 707 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 SNX21Q969T3 373 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 DRC1Q96MC2 740 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 CNTNAP3BQ96NU0 1288 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 MMTAG2Q9BU76 263 aaKnown RBP17.16■□□□□ 0.34
CDPF1-206ENST00000475605 CNTNAP3Q9BZ76 1288 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 HAPLN2Q9GZV7 340 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 CRISPLD1Q9H336 500 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 TRPV5Q9NQA5 729 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 ASAH2Q9NR71 780 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 PCDHB8Q9UN66 801 aa17.16■□□□□ 0.34
CDPF1-206ENST00000475605 DCDC2BA2VCK2 349 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 HEPACAM2A8MVW5 462 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 ZNF263O14978 683 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 CHRNB1P11230 501 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 CCNE1P24864 410 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
CDPF1-206ENST00000475605 SATB1Q01826 763 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 NOLC1Q14978 699 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDPF1-206ENST00000475605 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
CDPF1-206ENST00000475605 KRT79Q5XKE5 535 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 MAMSTRQ6ZN01 415 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 MFSD6LQ8IWD5 586 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 PGLYRP2Q96PD5 576 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 NTPCRQ9BSD7 190 aaKnown RBP17.15■□□□□ 0.34
CDPF1-206ENST00000475605 LRRC3Q9BY71 257 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 FAM126AQ9BYI3 521 aaPredicted RBP17.15■□□□□ 0.34
CDPF1-206ENST00000475605 RAB34Q9BZG1 259 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 TRPV4Q9HBA0 871 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 GMEB2Q9UKD1 530 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 YIPF1Q9Y548 306 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 STK24Q9Y6E0 443 aa17.15■□□□□ 0.34
CDPF1-206ENST00000475605 ARNTLO00327 626 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 TOM1L1O75674 476 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 CXCL8P10145 99 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 U2AF2P26368 475 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDPF1-206ENST00000475605 SOX9P48436 509 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 GUCY2FP51841 1108 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 LMNB2Q03252 620 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 DMWDQ09019 674 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 SPEM2Q0P670 501 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 TMEM161BQ8NDZ6 487 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 DEPDC1BQ8WUY9 529 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 INTS4Q96HW7 963 aaKnown RBP17.14■□□□□ 0.33
CDPF1-206ENST00000475605 PLIN2Q99541 437 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 C17orf75Q9HAS0 396 aa17.14■□□□□ 0.33
CDPF1-206ENST00000475605 RBM12Q9NTZ6 932 aaKnown RBP17.14■□□□□ 0.33
CDPF1-206ENST00000475605 CDV3Q9UKY7 258 aaKnown RBP17.14■□□□□ 0.33
CDPF1-206ENST00000475605 SPTBN2O15020 2390 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 A0A1W2PRU2 124 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 PRR5-ARHGAP8B1AHC4 643 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 M0QZQ0 153 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 OAZ2O95190 189 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 MAPTP10636 758 aaKnown RBP17.13■□□□□ 0.33
CDPF1-206ENST00000475605 SDHBP21912 280 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 GUCY2CP25092 1073 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 TNFSF9P41273 254 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 CCR3P51677 355 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 ARHGAP8P85298 464 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
CDPF1-206ENST00000475605 YWHAHQ04917 246 aaPredicted RBP17.13■□□□□ 0.33
CDPF1-206ENST00000475605 STRN3Q13033 797 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 DUSP4Q13115 394 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 WDR44Q5JSH3 913 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 STXBP5Q5T5C0 1151 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 PRR23BQ6ZRT6 265 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 TMC8Q8IU68 726 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 LEMD2Q8NC56 503 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 BEST2Q8NFU1 509 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 SPIRE2Q8WWL2 714 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 PNMA5Q96PV4 448 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 DNAJC25Q9H1X3 360 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 SLITRK6Q9H5Y7 841 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 MAFFQ9ULX9 164 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 SLC27A5Q9Y2P5 690 aa17.13■□□□□ 0.33
CDPF1-206ENST00000475605 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.13■□□□□ 0.33
CDPF1-206ENST00000475605 NPHP3-ACAD11A0A0J9YXS1 232 aa17.12■□□□□ 0.33
CDPF1-206ENST00000475605 SLC38A8A6NNN8 435 aa17.12■□□□□ 0.33
CDPF1-206ENST00000475605 CLDN3O15551 220 aa17.12■□□□□ 0.33
CDPF1-206ENST00000475605 PLS3P13797 630 aa17.12■□□□□ 0.33
CDPF1-206ENST00000475605 HOXC13P31276 330 aa17.12■□□□□ 0.33
CDPF1-206ENST00000475605 MATR3P43243 847 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDPF1-206ENST00000475605 CXCL12P48061 93 aa17.12■□□□□ 0.33
CDPF1-206ENST00000475605 NRLP54845 237 aa17.12■□□□□ 0.33
CDPF1-206ENST00000475605 MCL1Q07820 350 aa17.12■□□□□ 0.33
CDPF1-206ENST00000475605 SRSF5Q13243 272 aaKnown RBP17.12■□□□□ 0.33
CDPF1-206ENST00000475605 ZBTB6Q15916 424 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms