RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ARHGAP29Q52LW3 1261 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 RNF19BQ6ZMZ0 732 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 SKAP1Q86WV1 359 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 TMC8Q8IU68 726 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 ARID3BQ8IVW6 561 aaPredicted RBP20.84■□□□□ 0.93
SORT1-203ENST00000471996 ZFYVE19Q96K21 471 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 SUSD3Q96L08 255 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 ZMAT2Q96NC0 199 aaKnown RBP20.84■□□□□ 0.93
SORT1-203ENST00000471996 ZSWIM6Q9HCJ5 1215 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 TOPORSQ9NS56 1045 aaPredicted RBP20.84■□□□□ 0.93
SORT1-203ENST00000471996 WASF3Q9UPY6 502 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 CYP11B2P19099 503 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 RPL9P32969 192 aaKnown RBP20.83■□□□□ 0.93
SORT1-203ENST00000471996 GRM5P41594 1212 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 EFNA5P52803 228 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 IRX6P78412 446 aaPredicted RBP20.83■□□□□ 0.93
SORT1-203ENST00000471996 PPP2R5AQ15172 486 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 PKN3Q6P5Z2 889 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 HAUS6Q7Z4H7 955 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 CATSPER3Q86XQ3 398 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 GPIHBP1Q8IV16 184 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 CEP120Q8N960 986 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 APPL2Q8NEU8 664 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 KIFC3Q9BVG8 833 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 CCDC94Q9BW85 323 aaPredicted RBP20.83■□□□□ 0.93
SORT1-203ENST00000471996 TMEM121BQ9BXQ6 578 aaPredicted RBP20.83■□□□□ 0.93
SORT1-203ENST00000471996 TUFT1Q9NNX1 390 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 TNFSF13BQ9Y275 285 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 YIPF1Q9Y548 306 aa20.83■□□□□ 0.93
SORT1-203ENST00000471996 GIPC1O14908 333 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 CDKL5O76039 1030 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 CPB1P15086 417 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 NR5A1Q13285 461 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 STXBP5Q5T5C0 1151 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 PADI6Q6TGC4 694 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 BEST2Q8NFU1 509 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 DDX12PQ92771 950 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 MTMR9Q96QG7 549 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 NACC1Q96RE7 527 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 MKNK1Q9BUB5 465 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 OBP2AQ9NY56 170 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 SDK1Q7Z5N4 2213 aa20.82■□□□□ 0.92
SORT1-203ENST00000471996 STK36Q9NRP7 1315 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 TMEM8BA6NDV4 472 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 DPYSL4O14531 572 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 KCNE1P15382 129 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 OSTNP61366 133 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 ZNF252P-AS1Q0IIN9 211 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 FOXC1Q12948 553 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 PLD1Q13393 1074 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 TCEAL6Q6IPX3 200 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 TNFRSF25Q93038 417 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 TCEAL3Q969E4 200 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 EDEM2Q9BV94 578 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 ADAM33Q9BZ11 813 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 DNAJC25Q9H1X3 360 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 CYP46A1Q9Y6A2 500 aa20.81■□□□□ 0.92
SORT1-203ENST00000471996 NEMFO60524 1076 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 ATG13O75143 517 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 MED24O75448 989 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 VNN2O95498 520 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 MCM4P33991 863 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 KRT2P35908 639 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 PLCB2Q00722 1185 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 TNK2Q07912 1038 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 PLK5Q496M5 336 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 IFT74Q96LB3 600 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 TBC1D32Q96NH3 1257 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 TMEM209Q96SK2 561 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 CDT1Q9H211 546 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 SLC8A2Q9UPR5 921 aa20.8■□□□□ 0.92
SORT1-203ENST00000471996 ZFYVE26Q68DK2 2539 aa20.79■□□□□ 0.92
SORT1-203ENST00000471996 C4orf47A7E2U8 309 aa20.79■□□□□ 0.92
SORT1-203ENST00000471996 SPINK2P20155 84 aa20.79■□□□□ 0.92
SORT1-203ENST00000471996 EPHB3P54753 998 aa20.79■□□□□ 0.92
SORT1-203ENST00000471996 CACNB1Q02641 598 aaPredicted RBP20.79■□□□□ 0.92
SORT1-203ENST00000471996 SCRN1Q12765 414 aa20.79■□□□□ 0.92
SORT1-203ENST00000471996 CAMKK1Q8N5S9 505 aa20.79■□□□□ 0.92
SORT1-203ENST00000471996 C18orf25Q96B23 403 aaPredicted RBP20.79■□□□□ 0.92
SORT1-203ENST00000471996 YTHDC1Q96MU7 727 aaKnown RBP20.79■□□□□ 0.92
SORT1-203ENST00000471996 DUSP15Q9H1R2 295 aaPredicted RBP20.79■□□□□ 0.92
SORT1-203ENST00000471996 PTPRHQ9HD43 1115 aa20.79■□□□□ 0.92
SORT1-203ENST00000471996 CNTN3Q9P232 1028 aa20.79■□□□□ 0.92
SORT1-203ENST00000471996 TPCN1Q9ULQ1 816 aa20.79■□□□□ 0.92
SORT1-203ENST00000471996 PCDHB8Q9UN66 801 aa20.79■□□□□ 0.92
SORT1-203ENST00000471996 PDCD11Q14690 1871 aaKnown RBP20.78■□□□□ 0.92
SORT1-203ENST00000471996 ARHGEF35A5YM69 484 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 SRRM3A6NNA2 597 aaPredicted RBP20.78■□□□□ 0.92
SORT1-203ENST00000471996 K7ERI5 159 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 WNT7AO00755 349 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 MARCKSP29966 332 aaPredicted RBP20.78■□□□□ 0.92
SORT1-203ENST00000471996 DUSP4Q13115 394 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 ITPRIPL2Q3MIP1 535 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 ZNF568Q3ZCX4 644 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 TMEM196Q5HYL7 178 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 DAB2IPQ5VWQ8 1189 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 GAREM2Q75VX8 874 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 BPIFB1Q8TDL5 484 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 GATA6Q92908 595 aa20.78■□□□□ 0.92
SORT1-203ENST00000471996 ACAP3Q96P50 834 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms