RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 GYPCP04921 128 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 TUSC3Q13454 348 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 ZNF699Q32M78 642 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 ICE2Q659A1 982 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 GJB7Q6PEY0 223 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.37□□□□□ -1.23
SCAF4-204ENST00000467731 ZNF513Q8N8E2 541 aaPredicted RBP7.37□□□□□ -1.23
SCAF4-204ENST00000467731 MYRIPQ8NFW9 859 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 NEK11Q8NG66 645 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 ZNF689Q96CS4 500 aaPredicted RBP7.37□□□□□ -1.23
SCAF4-204ENST00000467731 TTYH3Q9C0H2 523 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 RC3H2Q9HBD1 1191 aaKnown RBP7.37□□□□□ -1.23
SCAF4-204ENST00000467731 PLCB1Q9NQ66 1216 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 DNAJB4Q9UDY4 337 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 TRANK1O15050 2925 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 PODXLO00592 558 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 PIRO00625 290 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 ZC3H11AO75152 810 aaKnown RBP eCLIP7.37□□□□□ -1.23
SCAF4-204ENST00000467731 GJB5O95377 273 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 UCHL3P15374 230 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 IGFBP6P24592 240 aaPredicted RBP7.37□□□□□ -1.23
SCAF4-204ENST00000467731 LRPAP1P30533 357 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 RBP5P82980 135 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 DSC1Q08554 894 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 UPP1Q16831 310 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 SGSM1Q2NKQ1 1148 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 WDR72Q3MJ13 1102 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 WDR44Q5JSH3 913 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 C9orf50Q5SZB4 431 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 KLHDC7AQ5VTJ3 777 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 RRAGAQ7L523 313 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 ARHGEF19Q8IW93 802 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 COLGALT2Q8IYK4 626 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 PPM1KQ8N3J5 372 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 C3orf58Q8NDZ4 430 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 TATDN2Q93075 761 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 HPDLQ96IR7 371 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 MRPL9Q9BYD2 267 aaKnown RBP7.37□□□□□ -1.23
SCAF4-204ENST00000467731 GANQ9H2C0 597 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 APOBEC3GQ9HC16 384 aaKnown RBP7.37□□□□□ -1.23
SCAF4-204ENST00000467731 NUB1Q9Y5A7 615 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 FHOD1Q9Y613 1164 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 SLC4A7Q9Y6M7 1214 aa7.37□□□□□ -1.23
SCAF4-204ENST00000467731 MYO9BQ13459 2157 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 CALRP27797 417 aaKnown RBP7.36□□□□□ -1.23
SCAF4-204ENST00000467731 CASP14P31944 242 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 POLR2FP61218 127 aaKnown RBP7.36□□□□□ -1.23
SCAF4-204ENST00000467731 LRRC43Q8N309 656 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 LRRC52Q8N7C0 313 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 CCDC150Q8NCX0 1101 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 CPLX3Q8WVH0 158 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 RSPH1Q8WYR4 309 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 KAT5Q92993 513 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 PDLIM2Q96JY6 352 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 NT5C1BQ96P26 610 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 FAM193BQ96PV7 902 aaPredicted RBP7.36□□□□□ -1.23
SCAF4-204ENST00000467731 YME1L1Q96TA2 773 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 NRDE2Q9H7Z3 1164 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 NLRC4Q9NPP4 1024 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 AJAP1Q9UKB5 411 aaPredicted RBP7.36□□□□□ -1.23
SCAF4-204ENST00000467731 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.36□□□□□ -1.232e-7■■□□□ 12.1
SCAF4-204ENST00000467731 VWA8A3KMH1 1905 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 F8W810 466 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 RNF225M0QZC1 329 aaPredicted RBP7.36□□□□□ -1.23
SCAF4-204ENST00000467731 CAPN15O75808 1086 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 B3GAT3O94766 335 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 ATP2A2P16615 1042 aaKnown RBP7.36□□□□□ -1.23
SCAF4-204ENST00000467731 ATICP31939 592 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 PBX3P40426 434 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 OR1G1P47890 313 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 FXR1P51114 621 aaKnown RBP eCLIP7.36□□□□□ -1.23
SCAF4-204ENST00000467731 MYO1EQ12965 1108 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 FIGNQ5HY92 759 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 RASIP1Q5U651 963 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 NLRC5Q86WI3 1866 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 HASPINQ8TF76 798 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 ITFG2Q969R8 447 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 SLC9A7Q96T83 725 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 MTIF3Q9H2K0 278 aaKnown RBP7.36□□□□□ -1.23
SCAF4-204ENST00000467731 VRTNQ9H8Y1 702 aa7.36□□□□□ -1.23
SCAF4-204ENST00000467731 UBE2TQ9NPD8 197 aaPredicted RBP7.36□□□□□ -1.23
SCAF4-204ENST00000467731 NXF1Q9UBU9 619 aaKnown RBP7.36□□□□□ -1.23
SCAF4-204ENST00000467731 H0YGN5 161 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 SPTLC1O15269 473 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 ITGB1P05556 798 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 RPL9P32969 192 aaKnown RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 TAF6P49848 677 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 LILRA4P59901 499 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 GCNT1Q02742 428 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 GOLGA8FQ08AF8 430 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 GOLGA8DPQ0D2H9 430 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 TBX2Q13207 712 aaPredicted RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 RAPGEF1Q13905 1077 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 BTG3Q14201 252 aaPredicted RBP7.35□□□□□ -1.23
SCAF4-204ENST00000467731 SHHQ15465 462 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 ZNF667Q5HYK9 610 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 IQCEQ6IPM2 695 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 SCARA5Q6ZMJ2 495 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 CACNA2D4Q7Z3S7 1137 aa7.35□□□□□ -1.23
SCAF4-204ENST00000467731 HERC6Q8IVU3 1022 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms