RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 MIGA2Q7L4E1 593 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 GLCCI1Q86VQ1 547 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 ADGRG5Q8IZF4 528 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 IL17RDQ8NFM7 739 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 LRIG1Q96JA1 1093 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 VKORC1Q9BQB6 163 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 PUS7LQ9H0K6 701 aaKnown RBP4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 TDP1Q9NUW8 608 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 ASB6Q9NWX5 421 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 SLC45A2Q9UMX9 530 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 LIMCH1Q9UPQ0 1083 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 DMTF1Q9Y222 760 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 PCDHGA9Q9Y5G4 932 aaKnown RBP4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 PCDHGA8Q9Y5G5 932 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 PCDHGA7Q9Y5G6 932 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 PCDHGA6Q9Y5G7 932 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 PCDHGA3Q9Y5H0 932 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 SETD1BQ9UPS6 1966 aaKnown RBP4.09□□□□□ -1.76
GTF3C3-209ENST00000466862 YY2O15391 372 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 PEX1O43933 1283 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 GATA3P23771 443 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 ANXA11P50995 505 aaKnown RBP4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 ATXN1P54253 815 aaKnown RBP4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 ZNF280AP59817 542 aaPredicted RBP4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 CREMQ03060 361 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 NBPF8Q3BBV2 869 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 ZNF788Q6ZQV5 615 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 C1QL2Q7Z5L3 287 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 CLNKQ7Z7G1 428 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 DDX42Q86XP3 938 aaKnown RBP eCLIP4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 AMOTL1Q8IY63 956 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 ATL2Q8NHH9 583 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 MYCBPAPQ8TBZ2 947 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 NSUN6Q8TEA1 469 aaKnown RBP4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 ZNF384Q8TF68 577 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 IL17RBQ9NRM6 502 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 INTS13Q9NVM9 706 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 USP35Q9P2H5 1018 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 SERPINB13Q9UIV8 391 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 PCDHA13Q9Y5I0 950 aa4.08□□□□□ -1.76
GTF3C3-209ENST00000466862 VWC2LB2RUY7 222 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 ADM5C9JUS6 153 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 MT-CO1P00395 513 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 MTHFD1P11586 935 aaKnown RBP4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 PCSK6P29122 969 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 RPS7P62081 194 aaKnown RBP4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 POU6F2P78424 691 aaPredicted RBP4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 IL10RAQ13651 578 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 RAB39AQ14964 217 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 ATP2B3Q16720 1220 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 UTP14CQ5TAP6 766 aaKnown RBP4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 PPM1NQ8N819 430 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 PDPRQ8NCN5 879 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 SLC30A5Q8TAD4 765 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 HDAC10Q969S8 669 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 TMX1Q9H3N1 280 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 SLC5A4Q9NY91 659 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 MCM8Q9UJA3 840 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 ADAM21Q9UKJ8 722 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 NEU2Q9Y3R4 380 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 PCDHB1Q9Y5F3 818 aa4.07□□□□□ -1.76
GTF3C3-209ENST00000466862 CCDC195A0A1B0GUA6 201 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 NT5C1B-RDH14C9J2C7 533 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 CDK4P11802 303 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 PPP3CBP16298 524 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 GRIA3P42263 894 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 FXR1P51114 621 aaKnown RBP eCLIP4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 HNRNPMP52272 730 aaKnown RBP eCLIP4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 KRTAP10-9P60411 292 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 DYRK1AQ13627 763 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 PTPRRQ15256 657 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 ABCB5Q2M3G0 1257 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 CD300EQ496F6 205 aaPredicted RBP4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 CFAP52Q8N1V2 620 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 DPF1Q92782 380 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 KAT5Q92993 513 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 TEKT5Q96M29 485 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 HEPHQ9BQS7 1158 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 C1QTNF7Q9BXJ2 289 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 PACSIN1Q9BY11 444 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 ETAA1Q9NY74 926 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 CALCOCO1Q9P1Z2 691 aa4.06□□□□□ -1.76
GTF3C3-209ENST00000466862 CCDC151A5D8V7 595 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 DNAJC9-AS1A6NH13 148 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 CCDC154A6NI56 674 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 LINC00473A8K010 186 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 E7ENX8 843 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 GABRDO14764 452 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 LPOP22079 712 aaPredicted RBP4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 SLC16A1P53985 500 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 TAP2Q03519 686 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 MTMR1Q13613 665 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 HLXQ14774 488 aaPredicted RBP4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 SYDE2Q5VT97 1194 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 TAPT1Q6NXT6 567 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 TSHZ1Q6ZSZ6 1077 aa4.05□□□□□ -1.76
GTF3C3-209ENST00000466862 GRASPQ7Z6J2 395 aaPredicted RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms