RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 CTTNQ14247 550 aaKnown RBP16.62■□□□□ 0.25
NCSTN-210ENST00000465223 ITPRIPL2Q3MIP1 535 aa16.62■□□□□ 0.25
NCSTN-210ENST00000465223 TPGS2Q68CL5 300 aa16.62■□□□□ 0.25
NCSTN-210ENST00000465223 RAB44Q7Z6P3 723 aaPredicted RBP16.62■□□□□ 0.25
NCSTN-210ENST00000465223 DYDC2Q96IM9 177 aa16.62■□□□□ 0.25
NCSTN-210ENST00000465223 PPP1R10Q96QC0 940 aaKnown RBP16.62■□□□□ 0.25
NCSTN-210ENST00000465223 NFKBIZQ9BYH8 718 aa16.62■□□□□ 0.25
NCSTN-210ENST00000465223 TPSD1Q9BZJ3 242 aa16.62■□□□□ 0.25
NCSTN-210ENST00000465223 FBRSL1Q9HCM7 1045 aaKnown RBP16.62■□□□□ 0.25
NCSTN-210ENST00000465223 RAXQ9Y2V3 346 aa16.62■□□□□ 0.25
NCSTN-210ENST00000465223 BPTFQ12830 3046 aa16.62■□□□□ 0.25
NCSTN-210ENST00000465223 KIAA1549LQ6ZVL6 1849 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 SHROOM3Q8TF72 1996 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 H0Y626 953 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 TRIM16O95361 564 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 PRAMEF12O95522 483 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 APBB3O95704 486 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 DHPSP49366 369 aaPredicted RBP16.61■□□□□ 0.25
NCSTN-210ENST00000465223 C19orf57Q0VDD7 668 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 NECTIN1Q15223 517 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 TRIM61Q5EBN2 209 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 RPLP0P6Q8NHW5 317 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 MDM1Q8TC05 714 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 BPIFB1Q8TDL5 484 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 CCDC86Q9H6F5 360 aaKnown RBP16.61■□□□□ 0.25
NCSTN-210ENST00000465223 AFF4Q9UHB7 1163 aaKnown RBP16.61■□□□□ 0.25
NCSTN-210ENST00000465223 DDX25Q9UHL0 483 aaKnown RBP16.61■□□□□ 0.25
NCSTN-210ENST00000465223 YIPF1Q9Y548 306 aa16.61■□□□□ 0.25
NCSTN-210ENST00000465223 TNRC6BQ9UPQ9 1833 aaKnown RBP16.61■□□□□ 0.25
NCSTN-210ENST00000465223 ABCB7O75027 752 aa16.6■□□□□ 0.25
NCSTN-210ENST00000465223 U2AF2P26368 475 aaKnown RBP eCLIP16.6■□□□□ 0.25
NCSTN-210ENST00000465223 CYP4A11Q02928 519 aa16.6■□□□□ 0.25
NCSTN-210ENST00000465223 SOX4Q06945 474 aaPredicted RBP16.6■□□□□ 0.25
NCSTN-210ENST00000465223 SEMA3BQ13214 749 aa16.6■□□□□ 0.25
NCSTN-210ENST00000465223 MRPL58Q14197 206 aaKnown RBP16.6■□□□□ 0.25
NCSTN-210ENST00000465223 DMC1Q14565 340 aa16.6■□□□□ 0.25
NCSTN-210ENST00000465223 CTXN3Q4LDR2 81 aa16.6■□□□□ 0.25
NCSTN-210ENST00000465223 NAIF1Q69YI7 327 aaPredicted RBP16.6■□□□□ 0.25
NCSTN-210ENST00000465223 RNF19BQ6ZMZ0 732 aa16.6■□□□□ 0.25
NCSTN-210ENST00000465223 CCDC148Q8NFR7 591 aa16.6■□□□□ 0.25
NCSTN-210ENST00000465223 CRELD1Q96HD1 420 aa16.6■□□□□ 0.25
NCSTN-210ENST00000465223 POLR3FQ9H1D9 316 aaPredicted RBP16.6■□□□□ 0.25
NCSTN-210ENST00000465223 DNAJC25Q9H1X3 360 aa16.6■□□□□ 0.25
NCSTN-210ENST00000465223 FSCN3Q9NQT6 498 aa16.6■□□□□ 0.25
NCSTN-210ENST00000465223 PRMT7Q9NVM4 692 aaPredicted RBP16.6■□□□□ 0.25
NCSTN-210ENST00000465223 EBF1Q9UH73 591 aa16.6■□□□□ 0.25
NCSTN-210ENST00000465223 OTOL1A6NHN0 477 aaPredicted RBP16.59■□□□□ 0.25
NCSTN-210ENST00000465223 LRRIQ4A6NIV6 560 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 H7C4K7 107 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 TRDMT1O14717 391 aaKnown RBP16.59■□□□□ 0.25
NCSTN-210ENST00000465223 N4BP3O15049 544 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 C1QL1O75973 258 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 ENGP17813 658 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 RDXP35241 583 aaKnown RBP16.59■□□□□ 0.25
NCSTN-210ENST00000465223 PLCB2Q00722 1185 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 LMAN2Q12907 356 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 EPHA7Q15375 998 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 TMEM132AQ24JP5 1023 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 GPR158Q5T848 1215 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 EEF1DP3Q658K8 133 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 GAREM2Q75VX8 874 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 UROC1Q96N76 676 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 SMG9Q9H0W8 520 aaKnown RBP16.59■□□□□ 0.25
NCSTN-210ENST00000465223 HPS4Q9NQG7 708 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 GKN1Q9NS71 199 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 OBP2AQ9NY56 170 aa16.59■□□□□ 0.25
NCSTN-210ENST00000465223 EVLQ9UI08 416 aaPredicted RBP16.59■□□□□ 0.25
NCSTN-210ENST00000465223 MBD1Q9UIS9 605 aaPredicted RBP16.59■□□□□ 0.25
NCSTN-210ENST00000465223 PI4KAP42356 2102 aa16.58■□□□□ 0.25
NCSTN-210ENST00000465223 VNN2O95498 520 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 EDN1P05305 212 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 NLRP5P59047 1200 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 TRIM68Q6AZZ1 485 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 NCAPH2Q6IBW4 605 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 SYT13Q7L8C5 426 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 PRIMPOLQ96LW4 560 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 POLR3CQ9BUI4 534 aaPredicted RBP16.58■□□□□ 0.24
NCSTN-210ENST00000465223 NUSAP1Q9BXS6 441 aaKnown RBP16.58■□□□□ 0.24
NCSTN-210ENST00000465223 CRISPLD1Q9H336 500 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 ATXN3LQ9H3M9 355 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 FZD8Q9H461 694 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 ZSWIM4Q9H7M6 989 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 GPRC5CQ9NQ84 441 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 TMEM74BQ9NUR3 256 aa16.58■□□□□ 0.24
NCSTN-210ENST00000465223 PTPRDP23468 1912 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 SYN3O14994 580 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 CPB1P15086 417 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 MCM2P49736 904 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 GALK1P51570 392 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 RUNX3Q13761 415 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 PTPAQ15257 358 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 ZNF423Q2M1K9 1284 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 USP39Q53GS9 565 aaKnown RBP16.57■□□□□ 0.24
NCSTN-210ENST00000465223 MOXD1Q6UVY6 613 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 ARMCX6Q7L4S7 300 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 MAEAQ7L5Y9 396 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 DHX32Q7L7V1 743 aaKnown RBP16.57■□□□□ 0.24
NCSTN-210ENST00000465223 TPH2Q8IWU9 490 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 EZH1Q92800 747 aaPredicted RBP16.57■□□□□ 0.24
NCSTN-210ENST00000465223 PGLYRP2Q96PD5 576 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms