RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 UNGP13051 313 aaPredicted RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 KRT15P19012 456 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 CA4P22748 312 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 GTF2H1P32780 548 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 RPA3P35244 121 aaPredicted RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 VPS41P49754 854 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 HSPA2P54652 639 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 KCNQ4P56696 695 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 GTF2IP78347 998 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 ENPEPQ07075 957 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 ADCY1Q08828 1119 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 SLC1A5Q15758 541 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 PKN2Q16513 984 aaKnown RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 PCNX4Q63HM2 1172 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 KRT39Q6A163 491 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 CYP4F22Q6NT55 531 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 HHIPL2Q6UWX4 724 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 SESTD1Q86VW0 696 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 ZNF677Q86XU0 584 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 SIAH1Q8IUQ4 282 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 RHOT1Q8IXI2 618 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 MCOLN2Q8IZK6 566 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 EXD1Q8NHP7 514 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 SEMA4DQ92854 862 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 PTCD3Q96EY7 689 aaKnown RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 RBM17Q96I25 401 aaKnown RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 IWS1Q96ST2 819 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 LXNQ9BS40 222 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 BTBD10Q9BSF8 475 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 CCDC28BQ9BUN5 200 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 TIPINQ9BVW5 301 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 TEKT3Q9BXF9 490 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 OSBPL8Q9BZF1 889 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 PHACTR1Q9C0D0 580 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 COA1Q9GZY4 146 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 UNC45AQ9H3U1 944 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 PCIF1Q9H4Z3 704 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 TMEM8AQ9HCN3 771 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 ANKFY1Q9P2R3 1169 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 PSMC3IPQ9P2W1 217 aaPredicted RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 POLLQ9UGP5 575 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 SCOCQ9UIL1 159 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 C2CD2Q9Y426 696 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 UMODL1Q5DID0 1318 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 ZNFX1Q9P2E3 1918 aaKnown RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 H0Y3Z8 333 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 ALOX15BO15296 676 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 RAD21O60216 631 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 HAUS5O94927 633 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 RTN3O95197 1032 aaPredicted RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 NDUFB10O96000 172 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 ADRB2P07550 413 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 FDX1P10109 184 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 BMP3P12645 472 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 PLS3P13797 630 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 RPS6KA3P51812 740 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 SNAP25P60880 206 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 GTF2BQ00403 316 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 SLC34A1Q06495 639 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 KRT72Q14CN4 511 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 MORF4L2Q15014 288 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 CCDC6Q16204 474 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 PDCD2Q16342 344 aaPredicted RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 GSTA3Q16772 222 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 P3H1Q32P28 736 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 GNPTABQ3T906 1256 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 CERKLQ49MI3 558 aaPredicted RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 KHDC1Q4VXA5 237 aaKnown RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 EFHC2Q5JST6 749 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 SNX30Q5VWJ9 437 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 FAM91A1Q658Y4 838 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 PADI6Q6TGC4 694 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 TMEM179Q6ZVK1 233 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 OGFOD1Q8N543 542 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 TMC2Q8TDI7 906 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 BICD1Q96G01 975 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 CADM1Q9BY67 442 aaKnown RBP7.72□□□□□ -1.17
USP48-206ENST00000464577 FAM192AQ9GZU8 254 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 ACP6Q9NPH0 428 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 DLGAP2Q9P1A6 1054 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 KANSL3Q9P2N6 904 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 SYNPO2Q9UMS6 1093 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 BCS1LQ9Y276 419 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 MYH11P35749 1972 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 MAGEA13PA6NCF6 341 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 TISP43B9A030 160 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 POC1B-GALNT4F8VUJ3 575 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 TM9SF1O15321 606 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 LIASO43766 372 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 ZC3H11AO75152 810 aaKnown RBP eCLIP7.71□□□□□ -1.17
USP48-206ENST00000464577 AP1G2O75843 785 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 RFC5P40937 340 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 GCNT1Q02742 428 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 AP1B1Q10567 949 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 RCN1Q15293 331 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 LLGL1Q15334 1064 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 SLC5A9Q2M3M2 681 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 CEP55Q53EZ4 464 aa7.71□□□□□ -1.17
USP48-206ENST00000464577 EAPPQ56P03 285 aaPredicted RBP7.71□□□□□ -1.17
USP48-206ENST00000464577 PRR5LQ6MZQ0 368 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms