RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 NPLOC4Q8TAT6 608 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GIPC2Q8TF65 315 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 DGCR14Q96DF8 476 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SETDB2Q96T68 719 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 B3GNT4Q9C0J1 378 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 DPH5Q9H2P9 285 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TIMMDC1Q9NPL8 285 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 C12orf4Q9NQ89 552 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CCDC177Q9NQR7 707 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 COMMD8Q9NX08 183 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TBK1Q9UHD2 729 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TTC7AQ9ULT0 858 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PACSIN2Q9UNF0 486 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CTNND2Q9UQB3 1225 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 NFS1Q9Y697 457 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 RGPD2P0DJD1 1756 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 MYH14Q7Z406 1995 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PHIPQ8WWQ0 1821 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ADGRA2Q96PE1 1338 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GOLGA8JA6NMD2 632 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 KIF28PB7ZC32 967 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 POLR2DO15514 142 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ZNF862O60290 1169 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 DCTN3O75935 186 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 BBOX1O75936 387 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TGFB3P10600 412 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PABPC1P11940 636 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CCNB1P14635 433 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GTF2H1P32780 548 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 IFNA8P32881 189 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SERPINB6P35237 376 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CLK3P49761 638 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 AP3M2P53677 418 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ADAM17P78536 824 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 BASP1P80723 227 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 AP1B1Q10567 949 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CBLBQ13191 982 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 MTMR3Q13615 1198 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 KRT31Q15323 416 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TWF2Q6IBS0 349 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 DSTYKQ6XUX3 929 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 VPS52Q8N1B4 723 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 NUP93Q8N1F7 819 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GALNT4Q8N4A0 578 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CCDC82Q8N4S0 544 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 NATD1Q8N6N6 113 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 LSM14AQ8ND56 463 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 C1orf131Q8NDD1 294 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 NGDNQ8NEJ9 315 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SH3TC2Q8TF17 1288 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PMEPA1Q969W9 287 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 NUDT16Q96DE0 195 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 COX4I2Q96KJ9 171 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 INPP4AQ96PE3 977 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TBCBQ99426 244 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TTC1Q99614 292 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 HGH1Q9BTY7 390 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CALN1Q9BXU9 219 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 RNF38Q9H0F5 515 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 NEUROG2Q9H2A3 272 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 NHEJ1Q9H9Q4 299 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 LIN28AQ9H9Z2 209 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PARVGQ9HBI0 331 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 USP29Q9HBJ7 922 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ZFYVE28Q9HCC9 887 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 KCNK9Q9NPC2 374 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SACM1LQ9NTJ5 587 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 FKBP14Q9NWM8 211 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GID8Q9NWU2 228 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 IL1RAPL1Q9NZN1 696 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GTF3C4Q9UKN8 822 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 UTP11Q9Y3A2 253 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 MAD1L1Q9Y6D9 718 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PLXNA3P51805 1871 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ZNF236Q9UL36 1845 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ZNF536O15090 1300 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CACNA1SQ13698 1873 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 A0A0D9SFI3 127 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 SMIM31A0A1B0GVY4 71 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 MANSC4A6NHS7 340 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 TMEM229AB2RXF0 380 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ERVV-2B6SEH9 535 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 E9PBE3 544 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 H3BUI4 141 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CDK2AP1O14519 115 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 MCF2LO15068 1137 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 VILLO15195 856 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ST8SIA5O15466 376 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CNOT3O75175 753 aaKnown RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 FTCDO95954 541 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 IL2RAP01589 272 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 ZBTB48P10074 688 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-205ENST00000463753 COL6A1P12109 1028 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PRKACAP17612 351 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 CDH3P22223 829 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 NR4A1P22736 598 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 MARK3P27448 753 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 PBX1P40424 430 aa3.81□□□□□ -1.8
COL8A1-205ENST00000463753 GSSP48637 474 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms