RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 STAU1O95793 577 aaKnown RBP18.69■□□□□ 0.58
SGCE-206ENST00000445866 ITGB1P05556 798 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 PAX3P23760 479 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 PBX2P40425 430 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 TNNC1P63316 161 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 PPM1KQ8N3J5 372 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 CLP1Q92989 425 aaKnown RBP18.69■□□□□ 0.58
SGCE-206ENST00000445866 MRFAP1L1Q96HT8 127 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 PLCB1Q9NQ66 1216 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 SPG21Q9NZD8 308 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 ADAM28Q9UKQ2 775 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 POLIQ9UNA4 740 aa18.69■□□□□ 0.58
SGCE-206ENST00000445866 TTC3P53804 2025 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 CEP290O15078 2479 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 LINC01553A4QN01 128 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 CARNS1A5YM72 827 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 I3L4J1 428 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 HUS1O60921 280 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 PBX1P40424 430 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 BRCC3P46736 316 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 TIGD5Q53EQ6 642 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 GJB7Q6PEY0 223 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 ARHGEF19Q8IW93 802 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 DRC7Q8IY82 874 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 SENP8Q96LD8 212 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 PRO3102Q9H379 93 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 SIX2Q9NPC8 291 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 GDAP2Q9NXN4 497 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 APEX2Q9UBZ4 518 aa18.68■□□□□ 0.58
SGCE-206ENST00000445866 RANBP2P49792 3224 aaKnown RBP18.67■□□□□ 0.58
SGCE-206ENST00000445866 TMEM189-UBE2V1I3L0A0 370 aa18.67■□□□□ 0.58
SGCE-206ENST00000445866 CA3P07451 260 aa18.67■□□□□ 0.58
SGCE-206ENST00000445866 BMPR1AP36894 532 aa18.67■□□□□ 0.58
SGCE-206ENST00000445866 SPECC1LQ69YQ0 1117 aa18.67■□□□□ 0.58
SGCE-206ENST00000445866 DPY19L2P1Q6NXN4 242 aa18.67■□□□□ 0.58
SGCE-206ENST00000445866 VSTM4Q8IW00 320 aa18.67■□□□□ 0.58
SGCE-206ENST00000445866 IGSF21Q96ID5 467 aa18.67■□□□□ 0.58
SGCE-206ENST00000445866 PBX4Q9BYU1 374 aa18.67■□□□□ 0.58
SGCE-206ENST00000445866 NIF3L1Q9GZT8 377 aa18.67■□□□□ 0.58
SGCE-206ENST00000445866 DNAJC12Q9UKB3 198 aa18.67■□□□□ 0.58
SGCE-206ENST00000445866 YBX2Q9Y2T7 364 aaKnown RBP18.67■□□□□ 0.58
SGCE-206ENST00000445866 NOL4O94818 638 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 WEE2P0C1S8 567 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 UCHL3P15374 230 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 TRIM21P19474 475 aaKnown RBP18.66■□□□□ 0.58
SGCE-206ENST00000445866 MFAP3P55082 362 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 POLR2FP61218 127 aaKnown RBP18.66■□□□□ 0.58
SGCE-206ENST00000445866 RAB30Q15771 203 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 SCARA5Q6ZMJ2 495 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 TMEM173Q86WV6 379 aaPredicted RBP18.66■□□□□ 0.58
SGCE-206ENST00000445866 APPL2Q8NEU8 664 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 CPLX3Q8WVH0 158 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 ANP32BQ92688 251 aaKnown RBP18.66■□□□□ 0.58
SGCE-206ENST00000445866 NUP58Q9BVL2 599 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 MARCH5Q9NX47 278 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 EPHB6O15197 1021 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 TBXAS1P24557 533 aaPredicted RBP18.66■□□□□ 0.58
SGCE-206ENST00000445866 AARSP49588 968 aaKnown RBP eCLIP18.66■□□□□ 0.58
SGCE-206ENST00000445866 CDH8P55286 799 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 KRT17Q04695 432 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 CUL2Q13617 745 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 ARHGAP44Q17R89 818 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 TMC6Q7Z403 805 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 SLC39A11Q8N1S5 342 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 BCL7CQ8WUZ0 217 aaPredicted RBP18.66■□□□□ 0.58
SGCE-206ENST00000445866 TMEM169Q96HH4 297 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 FAXDC2Q96IV6 333 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 SUSD3Q96L08 255 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 GPR62Q9BZJ7 368 aa18.66■□□□□ 0.58
SGCE-206ENST00000445866 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.66■□□□□ 0.58
SGCE-206ENST00000445866 TIMM13Q9Y5L4 95 aaPredicted RBP18.66■□□□□ 0.58
SGCE-206ENST00000445866 ARHGEF15O94989 841 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 LINC00271P0C7V0 271 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 CTNNB1P35222 781 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 PPM1AP35813 382 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 GCNT1Q02742 428 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 SOWAHAQ2M3V2 549 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 FAM171A1Q5VUB5 890 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 IQCEQ6IPM2 695 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 DPH6Q7L8W6 267 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 CACNA2D4Q7Z3S7 1137 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 PPFIBP1Q86W92 1011 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 KAT5Q92993 513 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 FAM81BQ96LP2 452 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 C17orf80Q9BSJ5 609 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 NKX2-4Q9H2Z4 354 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 CYP3A43Q9HB55 503 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 NLRC4Q9NPP4 1024 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 MTUS1Q9ULD2 1270 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 COLQQ9Y215 455 aaPredicted RBP18.65■□□□□ 0.58
SGCE-206ENST00000445866 RWDD3Q9Y3V2 267 aa18.65■□□□□ 0.58
SGCE-206ENST00000445866 TNRC18O15417 2968 aaPredicted RBP18.65■□□□□ 0.58
SGCE-206ENST00000445866 M0QZQ0 153 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 FGF18O76093 207 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 ODC1P11926 461 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 ASPAP45381 313 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 TAP1Q03518 808 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 ELAVL2Q12926 359 aaKnown RBP18.64■□□□□ 0.57
SGCE-206ENST00000445866 RAPGEF1Q13905 1077 aa18.64■□□□□ 0.57
SGCE-206ENST00000445866 WSCD1Q658N2 575 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms