RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 THPOP40225 353 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 GPC5P78333 572 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 WDR72Q3MJ13 1102 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 FBXO47Q5MNV8 452 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 SLFN11Q7Z7L1 901 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 USP38Q8NB14 1042 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 TPCN2Q8NHX9 752 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 HPDLQ96IR7 371 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 BEGAINQ9BUH8 593 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 PDCD11Q14690 1871 aaKnown RBP18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 GRID2IPA4D2P6 1211 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 DYNC1I1O14576 645 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 ENC1O14682 589 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 PALMO75781 387 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 MTA2O94776 668 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 CD4P01730 458 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 WEE2P0C1S8 567 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 TWF2Q6IBS0 349 aaKnown RBP18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 DNAAF5Q86Y56 855 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 LRRC52Q8N7C0 313 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 LRRC57Q8N9N7 239 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 SLC35G2Q8TBE7 412 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 ZNF606Q8WXB4 792 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 THAP2Q9H0W7 228 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 ERVK-5Q9HDB9 667 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 PTPN22Q9Y2R2 807 aa18.18■□□□□ 0.5
TMEM39B-203ENST00000441402 A0A0U1RQG5 324 aaPredicted RBP18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 SMIM28A0A1B0GU29 152 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 A0A1W2PQ45 241 aaPredicted RBP18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 A0A1W2PQY0 241 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 PAEPP09466 180 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 CTSHP09668 335 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 AKAP5P24588 427 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 NOP2P46087 812 aaKnown RBP18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 MYO1EQ12965 1108 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 MEI1Q5TIA1 1274 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 MRPL10Q7Z7H8 261 aaKnown RBP18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 SYCE1Q8N0S2 351 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 CEP112Q8N8E3 955 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 VCPIP1Q96JH7 1222 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 CARD6Q9BX69 1037 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 TLR10Q9BXR5 811 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 CXCL16Q9H2A7 254 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 RNF39Q9H2S5 420 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 TRMT13Q9NUP7 481 aaKnown RBP18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 NXF1Q9UBU9 619 aaKnown RBP18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 GTF3C4Q9UKN8 822 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 SNX12Q9UMY4 172 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 POLIQ9UNA4 740 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 NOD1Q9Y239 953 aa18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.17■□□□□ 0.5
TMEM39B-203ENST00000441402 ZNF623O75123 536 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 CLSTN1O94985 981 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 CYP1A2P05177 515 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 TCP1P17987 556 aaKnown RBP18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 ABCB4P21439 1286 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 TUBB4BP68371 445 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 CENPCQ03188 943 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 NFX1Q12986 1120 aaKnown RBP18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 HACE1Q8IYU2 909 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 ARHGEF26Q96DR7 871 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 AGO3Q9H9G7 860 aaKnown RBP18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 STARD7Q9NQZ5 370 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 FAM105AQ9NUU6 356 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 PARP2Q9UGN5 583 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 PADI3Q9ULW8 664 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 PCDHGC3Q9UN70 934 aa18.16■□□□□ 0.5
TMEM39B-203ENST00000441402 EFCAB8A8MWE9 144 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 ARVCFO00192 962 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 PIRO00625 290 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 MYBL1P10243 752 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 ZSCAN20P17040 1043 aaPredicted RBP18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 GUCY2FP51841 1108 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 INCA1Q0VD86 236 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 DSC3Q14574 896 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 MNS1Q8NEH6 495 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 TRIM11Q96F44 468 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 ZNF518BQ9C0D4 1074 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 SDCBP2Q9H190 292 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 ABCB6Q9NP58 842 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 PAK6Q9NQU5 681 aaPredicted RBP18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 HYOU1Q9Y4L1 999 aa18.15■□□□□ 0.5
TMEM39B-203ENST00000441402 KBTBD13C9JR72 458 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 DNM1LO00429 736 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 TLR3O15455 904 aaKnown RBP18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 THAP12O43422 761 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 CILPO75339 1184 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 CD58P19256 250 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 CDK7P50613 346 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 RAB27AP51159 221 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 NOMO3P69849 1222 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 LPIN1Q14693 890 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 C9orf57Q5W0N0 161 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 MCOLN2Q8IZK6 566 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 WHAMMQ8TF30 809 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 CYFIP2Q96F07 1278 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 APOL6Q9BWW8 343 aa18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 AVENQ9NQS1 362 aaPredicted RBP18.14■□□□□ 0.49
TMEM39B-203ENST00000441402 WBP1LQ9NX94 342 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms