RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ATMINO43313 823 aaPredicted RBP15.27■□□□□ 0.04
CALD1-207ENST00000430085 UNGP13051 313 aaPredicted RBP15.27■□□□□ 0.04
CALD1-207ENST00000430085 ATICP31939 592 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 ASPAP45381 313 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 NSFP46459 744 aaKnown RBP15.27■□□□□ 0.04
CALD1-207ENST00000430085 ZNF132P52740 706 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 PRMT2P55345 433 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 WDR72Q3MJ13 1102 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 ZNF572Q7Z3I7 529 aaPredicted RBP15.27■□□□□ 0.04
CALD1-207ENST00000430085 TRIM11Q96F44 468 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 KIF12Q96FN5 646 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 PBKQ96KB5 322 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 SELENOOQ9BVL4 669 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 PLEKHA5Q9HAU0 1116 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 XPNPEP3Q9NQH7 507 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 ITGA11Q9UKX5 1188 aa15.27■□□□□ 0.04
CALD1-207ENST00000430085 PIN4Q9Y237 131 aaKnown RBP15.27■□□□□ 0.04
CALD1-207ENST00000430085 BRCA2P51587 3418 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 M0QZ92 97 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 MYCNP04198 464 aaPredicted RBP15.27■□□□□ 0.03
CALD1-207ENST00000430085 CYP1A2P05177 515 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 WEE2P0C1S8 567 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 P4HA1P13674 534 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.03
CALD1-207ENST00000430085 ELNP15502 786 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 ITIH3Q06033 890 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 C2orf54Q08AI8 447 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 NBPF20Q3BBV1 942 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 NAA35Q5VZE5 725 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 SMYD5Q6GMV2 418 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 CCDC70Q6NSX1 233 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 PPP1R2P3Q6NXS1 205 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 TMEM40Q8WWA1 233 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 CPA5Q8WXQ8 436 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 FAXDC2Q96IV6 333 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 MS4A14Q96JA4 679 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 NUP85Q9BW27 656 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 EIF2AQ9BY44 585 aaKnown RBP15.27■□□□□ 0.03
CALD1-207ENST00000430085 ANKZF1Q9H8Y5 726 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 DPP3Q9NY33 737 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 SNTG2Q9NY99 539 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 UVRAGQ9P2Y5 699 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 POLIQ9UNA4 740 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 STXBP5LQ9Y2K9 1186 aa15.27■□□□□ 0.03
CALD1-207ENST00000430085 MTA2O94776 668 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 CYP1A1P04798 512 aaPredicted RBP15.26■□□□□ 0.03
CALD1-207ENST00000430085 MYBL1P10243 752 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 POLR2BP30876 1174 aaKnown RBP15.26■□□□□ 0.03
CALD1-207ENST00000430085 RBP5P82980 135 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 CENPCQ03188 943 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 ZNF394Q53GI3 561 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 FAM47CQ5HY64 1035 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 C11orf63Q6NUN7 778 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 RSPH3Q86UC2 560 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 MSANTD4Q8NCY6 345 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 SPATA4Q8NEY3 305 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 ZNF564Q8TBZ8 553 aaPredicted RBP15.26■□□□□ 0.03
CALD1-207ENST00000430085 CYFIP2Q96F07 1278 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 ABCB6Q9NP58 842 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 CNOT8Q9UFF9 292 aaKnown RBP15.26■□□□□ 0.03
CALD1-207ENST00000430085 GTF2IRD1Q9UHL9 959 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 AGAP1Q9UPQ3 857 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 DERAQ9Y315 318 aa15.26■□□□□ 0.03
CALD1-207ENST00000430085 TRIP12Q14669 1992 aaPredicted RBP15.26■□□□□ 0.03
CALD1-207ENST00000430085 CCND3P30281 292 aaPredicted RBP15.25■□□□□ 0.03
CALD1-207ENST00000430085 CLCN6P51797 869 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 NKX3-2P78367 333 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 PASD1Q8IV76 773 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 MCOLN2Q8IZK6 566 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 ZNF606Q8WXB4 792 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 HES6Q96HZ4 224 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 HPDLQ96IR7 371 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 CELF4Q9BZC1 486 aaKnown RBP15.25■□□□□ 0.03
CALD1-207ENST00000430085 RNF216Q9NWF9 866 aaPredicted RBP15.25■□□□□ 0.03
CALD1-207ENST00000430085 SMARCAL1Q9NZC9 954 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 EHD2Q9NZN4 543 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 CHORDC1Q9UHD1 332 aaPredicted RBP15.25■□□□□ 0.03
CALD1-207ENST00000430085 TMEM110-MUSTN1A8MSY1 372 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 ADAMTS4O75173 837 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 TUBBP07437 444 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 SNX27Q96L92 541 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 BCO2Q9BYV7 579 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 VRTNQ9H8Y1 702 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 CITO14578 2027 aa15.25■□□□□ 0.03
CALD1-207ENST00000430085 CEP104O60308 925 aa15.24■□□□□ 0.03
CALD1-207ENST00000430085 SSTR3P32745 418 aaPredicted RBP15.24■□□□□ 0.03
CALD1-207ENST00000430085 RAP1GAPP47736 663 aa15.24■□□□□ 0.03
CALD1-207ENST00000430085 GUCY2FP51841 1108 aa15.24■□□□□ 0.03
CALD1-207ENST00000430085 NOMO3P69849 1222 aa15.24■□□□□ 0.03
CALD1-207ENST00000430085 MRPS6P82932 125 aaKnown RBP15.24■□□□□ 0.03
CALD1-207ENST00000430085 MESDQ14696 234 aa15.24■□□□□ 0.03
CALD1-207ENST00000430085 LIN9Q5TKA1 542 aa15.24■□□□□ 0.03
CALD1-207ENST00000430085 GDF6Q6KF10 455 aaPredicted RBP15.24■□□□□ 0.03
CALD1-207ENST00000430085 FBXO46Q6PJ61 603 aaPredicted RBP15.24■□□□□ 0.03
CALD1-207ENST00000430085 TMCO3Q6UWJ1 677 aa15.24■□□□□ 0.03
CALD1-207ENST00000430085 MMGT1Q8N4V1 131 aa15.24■□□□□ 0.03
CALD1-207ENST00000430085 CXorf38Q8TB03 319 aa15.24■□□□□ 0.03
CALD1-207ENST00000430085 APOL6Q9BWW8 343 aa15.24■□□□□ 0.03
CALD1-207ENST00000430085 NXF3Q9H4D5 531 aaKnown RBP15.24■□□□□ 0.03
CALD1-207ENST00000430085 HES2Q9Y543 173 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms