RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 HARSP12081 509 aaKnown RBP16.02■□□□□ 0.16
PDAP1-202ENST00000426447 KCNE1P15382 129 aa16.02■□□□□ 0.16
PDAP1-202ENST00000426447 CCT6AP40227 531 aaKnown RBP16.02■□□□□ 0.16
PDAP1-202ENST00000426447 PEX3P56589 373 aa16.02■□□□□ 0.16
PDAP1-202ENST00000426447 PLD1Q13393 1074 aa16.02■□□□□ 0.16
PDAP1-202ENST00000426447 SF3A2Q15428 464 aaKnown RBP16.02■□□□□ 0.16
PDAP1-202ENST00000426447 CCDC6Q16204 474 aa16.02■□□□□ 0.16
PDAP1-202ENST00000426447 HAUS3Q68CZ6 603 aa16.02■□□□□ 0.16
PDAP1-202ENST00000426447 ARID3BQ8IVW6 561 aaPredicted RBP16.02■□□□□ 0.16
PDAP1-202ENST00000426447 PGLYRP2Q96PD5 576 aa16.02■□□□□ 0.16
PDAP1-202ENST00000426447 TARS2Q9BW92 718 aaKnown RBP16.02■□□□□ 0.16
PDAP1-202ENST00000426447 NCANO14594 1321 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 MYBPHLA2RUH7 354 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 MCF2P10911 925 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 MUTP22033 750 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 ALDH1A3P47895 512 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 LIMK1P53667 647 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 YWHAHQ04917 246 aaPredicted RBP16.01■□□□□ 0.15
PDAP1-202ENST00000426447 FCHO2Q0JRZ9 810 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 PON2Q15165 354 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 SAFBQ15424 915 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDAP1-202ENST00000426447 ZNF174Q15697 407 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 ARHGAP29Q52LW3 1261 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 TXNDC11Q6PKC3 985 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 WDR5BQ86VZ2 330 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 SYNPOQ8N3V7 929 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 RSPRY1Q96DX4 576 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 TMEM134Q9H6X4 195 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 PTPRHQ9HD43 1115 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 GTSE1Q9NYZ3 720 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 CNTN3Q9P232 1028 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 PCDHB8Q9UN66 801 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 YIPF1Q9Y548 306 aa16.01■□□□□ 0.15
PDAP1-202ENST00000426447 ZFHX4Q86UP3 3567 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 PHLPP2Q6ZVD8 1323 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 OR52Z1P0C646 297 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 ZNF806P0C7X5 589 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 PMLP29590 882 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 HOXA6P31267 233 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 CTHP32929 405 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 NPTX2P47972 431 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 DUSP4Q13115 394 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 DMP1Q13316 513 aaPredicted RBP16■□□□□ 0.15
PDAP1-202ENST00000426447 CACNA2D4Q7Z3S7 1137 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 USP37Q86T82 979 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 LOXL4Q96JB6 756 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 ZFYVE19Q96K21 471 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 OXCT2Q9BYC2 517 aaPredicted RBP16■□□□□ 0.15
PDAP1-202ENST00000426447 ATXN3LQ9H3M9 355 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 KMT5AQ9NQR1 393 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 C2orf42Q9NWW7 574 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 KIAA1024Q9UPX6 916 aa16■□□□□ 0.15
PDAP1-202ENST00000426447 RBM19Q9Y4C8 960 aaKnown RBP16■□□□□ 0.15
PDAP1-202ENST00000426447 TIMM13Q9Y5L4 95 aaPredicted RBP16■□□□□ 0.15
PDAP1-202ENST00000426447 RPP40O75818 363 aaKnown RBP15.99■□□□□ 0.15
PDAP1-202ENST00000426447 OR4Q2P0C623 313 aa15.99■□□□□ 0.15
PDAP1-202ENST00000426447 CCDC192P0DO97 292 aa15.99■□□□□ 0.15
PDAP1-202ENST00000426447 ARHGAP15Q53QZ3 475 aa15.99■□□□□ 0.15
PDAP1-202ENST00000426447 STXBP5Q5T5C0 1151 aa15.99■□□□□ 0.15
PDAP1-202ENST00000426447 MPZL3Q6UWV2 235 aa15.99■□□□□ 0.15
PDAP1-202ENST00000426447 LRRC3Q9BY71 257 aa15.99■□□□□ 0.15
PDAP1-202ENST00000426447 RALYQ9UKM9 306 aaKnown RBP15.99■□□□□ 0.15
PDAP1-202ENST00000426447 SLC27A5Q9Y2P5 690 aa15.99■□□□□ 0.15
PDAP1-202ENST00000426447 TICRRQ7Z2Z1 1910 aa15.99■□□□□ 0.15
PDAP1-202ENST00000426447 F5P12259 2224 aa15.99■□□□□ 0.15
PDAP1-202ENST00000426447 EXTL3O43909 919 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 OAZ2O95190 189 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 FGF19O95750 216 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 HOXC13P31276 330 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 PXNP49023 591 aaPredicted RBP15.98■□□□□ 0.15
PDAP1-202ENST00000426447 GUCY1B3Q02153 619 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 STRN3Q13033 797 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 PTPAQ15257 358 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 ECM1Q16610 540 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 ME3Q16798 604 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 SEZ6Q53EL9 994 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 WDR44Q5JSH3 913 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 GPR158Q5T848 1215 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 STPG1Q5TH74 334 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 DSTYKQ6XUX3 929 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 TMC8Q8IU68 726 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 NSUN7Q8NE18 718 aaKnown RBP15.98■□□□□ 0.15
PDAP1-202ENST00000426447 BEST2Q8NFU1 509 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 GAB3Q8WWW8 586 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 ZBTB45Q96K62 511 aaPredicted RBP15.98■□□□□ 0.15
PDAP1-202ENST00000426447 RXFP3Q9NSD7 469 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 DDX19AQ9NUU7 478 aaKnown RBP15.98■□□□□ 0.15
PDAP1-202ENST00000426447 THG1LQ9NWX6 298 aaKnown RBP15.98■□□□□ 0.15
PDAP1-202ENST00000426447 ANKFY1Q9P2R3 1169 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 LRWD1Q9UFC0 647 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 SLC8A2Q9UPR5 921 aa15.98■□□□□ 0.15
PDAP1-202ENST00000426447 TM4SF5O14894 197 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 JAK2O60674 1132 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 ATG13O75143 517 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 HIP1RO75146 1068 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 GABRR2P28476 465 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 MATR3P43243 847 aaKnown RBP eCLIP15.97■□□□□ 0.157e-10■■■■■ 33.8
PDAP1-202ENST00000426447 SHC2P98077 582 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 PLCB2Q00722 1185 aa15.97■□□□□ 0.15
PDAP1-202ENST00000426447 TNK2Q07912 1038 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms