RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 IPO11Q9UI26 975 aaKnown RBP10.32□□□□□ -0.76
CMSS1-201ENST00000421999 LSM7Q9UK45 103 aaKnown RBP10.32□□□□□ -0.76
CMSS1-201ENST00000421999 EIF3CLB5ME19 914 aaKnown RBP10.31□□□□□ -0.76
CMSS1-201ENST00000421999 ACKR2O00590 384 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 PLEKP08567 350 aaPredicted RBP10.31□□□□□ -0.76
CMSS1-201ENST00000421999 SMIM10L2AP0DMW4 78 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 SMIM10L2BP0DMW5 78 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 ALDH3A1P30838 453 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 CAPSQ13938 189 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 BZW1Q7L1Q6 419 aaKnown RBP10.31□□□□□ -0.76
CMSS1-201ENST00000421999 ABRAQ8N0Z2 381 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 PARD3BQ8TEW8 1205 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 TTC25Q96NG3 672 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 EIF3CQ99613 913 aaKnown RBP10.31□□□□□ -0.76
CMSS1-201ENST00000421999 UBN1Q9NPG3 1134 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 JRKLQ9Y4A0 524 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 PCDHB12Q9Y5F1 795 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 NAV1Q8NEY1 1877 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 SRGAP2O75044 1071 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 PDGFRAP16234 1089 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 SMPD1P17405 629 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 ACO1P21399 889 aaKnown RBP10.31□□□□□ -0.76
CMSS1-201ENST00000421999 IGFBP4P22692 258 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 PRKCZQ05513 592 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 CYP24A1Q07973 514 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 STILQ15468 1287 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 ERCC6LQ2NKX8 1250 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 E4F1Q66K89 784 aaPredicted RBP10.31□□□□□ -0.76
CMSS1-201ENST00000421999 PPTC7Q8NI37 304 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 UBA3Q8TBC4 463 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 CPA5Q8WXQ8 436 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 SLC35C1Q96A29 364 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 AGPAT1Q99943 283 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 RNF19AQ9NV58 838 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 TIMM13Q9Y5L4 95 aaPredicted RBP10.31□□□□□ -0.76
CMSS1-201ENST00000421999 NRCAMQ92823 1304 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 IGF2BP3O00425 579 aaKnown RBP eCLIP10.31□□□□□ -0.76
CMSS1-201ENST00000421999 ARIH2O95376 493 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 CYBBP04839 570 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 ODC1P11926 461 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 SPIRE1Q08AE8 756 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 ORC1Q13415 861 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 NUDT18Q6ZVK8 323 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 BHMTQ93088 406 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 HTATIP2Q9BUP3 242 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 CDC23Q9UJX2 597 aa10.31□□□□□ -0.76
CMSS1-201ENST00000421999 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.3□□□□□ -0.76
CMSS1-201ENST00000421999 FOXN3O00409 490 aaPredicted RBP10.3□□□□□ -0.76
CMSS1-201ENST00000421999 DHX15O43143 795 aaKnown RBP10.3□□□□□ -0.76
CMSS1-201ENST00000421999 EIF4BP23588 611 aaKnown RBP10.3□□□□□ -0.76
CMSS1-201ENST00000421999 PHBP35232 272 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 GTF2F1P35269 517 aaKnown RBP eCLIP10.3□□□□□ -0.76
CMSS1-201ENST00000421999 GJA5P36382 358 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 GTF2BQ00403 316 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 CTXN3Q4LDR2 81 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 CDKL2Q92772 493 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 VPS18Q9P253 973 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 HDAC6Q9UBN7 1215 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 FARP1Q9Y4F1 1045 aaPredicted RBP10.3□□□□□ -0.76
CMSS1-201ENST00000421999 PPME1Q9Y570 386 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 CYB561D2O14569 222 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 PALMO75781 387 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 ECEL1O95672 775 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 VIMP08670 466 aaKnown RBP10.3□□□□□ -0.76
CMSS1-201ENST00000421999 FAM200BP0CF97 657 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 IKBKEQ14164 716 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 TRIM62Q9BVG3 475 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 DIS3Q9Y2L1 958 aaKnown RBP10.3□□□□□ -0.76
CMSS1-201ENST00000421999 TRPV2Q9Y5S1 764 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 P4HA2O15460 535 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 FGGP02679 453 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 IRF1P10914 325 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 NFKBIAP25963 317 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 PLTPP55058 493 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 CDH6P55285 790 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 PDE1BQ01064 536 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 HHATQ5VTY9 493 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 SPOPLQ6IQ16 392 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 RUFY4Q6ZNE9 571 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 KRT222Q8N1A0 295 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 BBOF1Q8ND07 529 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 AP1M1Q9BXS5 423 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 PLCB1Q9NQ66 1216 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 EHD2Q9NZN4 543 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 TFR2Q9UP52 801 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 PCDHB2Q9Y5E7 798 aa10.3□□□□□ -0.76
CMSS1-201ENST00000421999 ASTN1O14525 1302 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 RPTORQ8N122 1335 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 MMP3P08254 477 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 GTF2H1P32780 548 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 CTNNA1P35221 906 aaKnown RBP10.29□□□□□ -0.76
CMSS1-201ENST00000421999 MYBPC2Q14324 1141 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 SLC18A3Q16572 532 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 BBS9Q3SYG4 887 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 ZPBP2Q6X784 338 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 MMS22LQ6ZRQ5 1243 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 LRRC55Q6ZSA7 311 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 NECAB2Q7Z6G3 386 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 MYRIPQ8NFW9 859 aa10.29□□□□□ -0.76
CMSS1-201ENST00000421999 NPLOC4Q8TAT6 608 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms