RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 RLFQ13129 1914 aa6.05□□□□□ -1.44
SFXN1-202ENST00000421887 LAMA2P24043 3122 aaKnown RBP6.05□□□□□ -1.44
SFXN1-202ENST00000421887 PHIPQ8WWQ0 1821 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 MYBBP1AQ9BQG0 1328 aaKnown RBP6.04□□□□□ -1.44
SFXN1-202ENST00000421887 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
SFXN1-202ENST00000421887 CTNND1O60716 968 aaKnown RBP6.04□□□□□ -1.44
SFXN1-202ENST00000421887 IGKV5-2P06315 115 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 CSF1RP07333 972 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 MAPK4P31152 587 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 KRTAP10-9P60411 292 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 PPP2R2AP63151 447 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 IRX3P78415 501 aaPredicted RBP6.04□□□□□ -1.44
SFXN1-202ENST00000421887 UBE4AQ14139 1066 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 GCKRQ14397 625 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 TREML2Q5T2D2 321 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 MFSD14CQ5VZR4 134 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 TRIM68Q6AZZ1 485 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 APOBEC3HQ6NTF7 200 aaKnown RBP6.04□□□□□ -1.44
SFXN1-202ENST00000421887 KCNT2Q6UVM3 1135 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 ZNF662Q6ZS27 426 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 GAREM2Q75VX8 874 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 CXXC5Q7LFL8 322 aaKnown RBP6.04□□□□□ -1.44
SFXN1-202ENST00000421887 BHLHA9Q7RTU4 235 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 MRGPREQ86SM8 312 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 ANKRD35Q8N283 1001 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 NTN5Q8WTR8 489 aaPredicted RBP6.04□□□□□ -1.44
SFXN1-202ENST00000421887 LPAR1Q92633 364 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 SEC16BQ96JE7 1060 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 STK31Q9BXU1 1019 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 PRDM12Q9H4Q4 367 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 INCENPQ9NQS7 918 aa6.04□□□□□ -1.44
SFXN1-202ENST00000421887 DDX20Q9UHI6 824 aaKnown RBP6.04□□□□□ -1.44
SFXN1-202ENST00000421887 MUC6Q6W4X9 2439 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 FAM20BO75063 409 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 GLRX3O76003 335 aaKnown RBP6.03□□□□□ -1.44
SFXN1-202ENST00000421887 SOD2P04179 222 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 HMGB1P09429 215 aaKnown RBP6.03□□□□□ -1.44
SFXN1-202ENST00000421887 PTPN1P18031 435 aaKnown RBP6.03□□□□□ -1.44
SFXN1-202ENST00000421887 PTGS1P23219 599 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 FPGSQ05932 587 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 RIN1Q13671 783 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 TRIM60Q495X7 471 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 CCDC174Q6PII3 467 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 SLC39A5Q6ZMH5 540 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 GPRC5AQ8NFJ5 357 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 WDR48Q8TAF3 677 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 FAM84BQ96KN1 310 aaPredicted RBP6.03□□□□□ -1.44
SFXN1-202ENST00000421887 GALNT8Q9NY28 637 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 ACTR10Q9NZ32 417 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 ATAD5Q96QE3 1844 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 LOC285556D6RIA3 1793 aa6.03□□□□□ -1.44
SFXN1-202ENST00000421887 A0A1W2PRX2 142 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 FAM90A27PA6NNH2 459 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 FAM47E-STBD1D6RA91 191 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 SMIM22K7EJ46 135 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 AGRPO00253 132 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 SMAD7O15105 426 aaKnown RBP6.02□□□□□ -1.45
SFXN1-202ENST00000421887 DLX3O60479 287 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 ZNF37AP17032 561 aaPredicted RBP6.02□□□□□ -1.45
SFXN1-202ENST00000421887 HMGCS2P54868 508 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 HGFACQ04756 655 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 SPP2Q13103 211 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 CCL14Q16627 93 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 GJC2Q5T442 439 aaPredicted RBP6.02□□□□□ -1.45
SFXN1-202ENST00000421887 WDR78Q5VTH9 848 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 CDC42EP5Q6NZY7 148 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 SYCE2Q6PIF2 218 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 GSPT2Q8IYD1 628 aaKnown RBP6.02□□□□□ -1.45
SFXN1-202ENST00000421887 SH3RF2Q8TEC5 729 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 EDC3Q96F86 508 aaKnown RBP6.02□□□□□ -1.45
SFXN1-202ENST00000421887 UIMC1Q96RL1 719 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 PCGF6Q9BYE7 350 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 SLC28A3Q9HAS3 691 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.02□□□□□ -1.45
SFXN1-202ENST00000421887 AS3MTQ9HBK9 375 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 MSRAQ9UJ68 235 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 PACSIN3Q9UKS6 424 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 STRIP2Q9ULQ0 834 aa6.02□□□□□ -1.45
SFXN1-202ENST00000421887 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.02□□□□□ -1.45
SFXN1-202ENST00000421887 PIEZO1Q92508 2521 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 A0A0G2JNJ9 132 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 TRIM43BA6NCK2 446 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 ZAR1LA6NP61 321 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 CLTBP09497 229 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 MAN2A2P49641 1150 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 STAT5BP51692 787 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 GNAI1P63096 354 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 CCNA1P78396 465 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 CD83Q01151 205 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 TFF2Q03403 129 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 CALD1Q05682 793 aaKnown RBP6.01□□□□□ -1.45
SFXN1-202ENST00000421887 RAB30Q15771 203 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 MRM1Q6IN84 353 aaKnown RBP6.01□□□□□ -1.45
SFXN1-202ENST00000421887 LMBR1LQ6UX01 489 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 GPR142Q7Z601 462 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 CCDC146Q8IYE0 955 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 DCAF4Q8WV16 495 aa6.01□□□□□ -1.45
SFXN1-202ENST00000421887 SREK1Q8WXA9 508 aaKnown RBP6.01□□□□□ -1.45
SFXN1-202ENST00000421887 TRIM43Q96BQ3 446 aaPredicted RBP6.01□□□□□ -1.45
SFXN1-202ENST00000421887 MIEF2Q96C03 454 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms