RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TIPRLO75663 272 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 ITGA5P08648 1049 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 ZSCAN22P10073 491 aaPredicted RBP5.63□□□□□ -1.51
LSM5-205ENST00000409952 ATF2P15336 505 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 CALRP27797 417 aaKnown RBP5.63□□□□□ -1.51
LSM5-205ENST00000409952 PAPOLAP51003 745 aaKnown RBP5.63□□□□□ -1.51
LSM5-205ENST00000409952 NR1H2P55055 460 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 NRG3P56975 720 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 RPS16P62249 146 aaKnown RBP5.63□□□□□ -1.51
LSM5-205ENST00000409952 VAMP2P63027 116 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 ZBED6P86452 979 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 NOLC1Q14978 699 aaKnown RBP eCLIP5.63□□□□□ -1.51
LSM5-205ENST00000409952 KHDC1LQ5JSQ8 128 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 LIN54Q6MZP7 749 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 C2CD5Q86YS7 1000 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 DCP2Q8IU60 420 aaKnown RBP5.63□□□□□ -1.51
LSM5-205ENST00000409952 ADGRG2Q8IZP9 1017 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 TSPYL6Q8N831 410 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 GPR156Q8NFN8 814 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 CALML6Q8TD86 181 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 IPO4Q8TEX9 1081 aaKnown RBP5.63□□□□□ -1.51
LSM5-205ENST00000409952 STYXQ8WUJ0 223 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 SEC14L1Q92503 715 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 NAP1L5Q96NT1 182 aaPredicted RBP5.63□□□□□ -1.51
LSM5-205ENST00000409952 VRK1Q99986 396 aaPredicted RBP5.63□□□□□ -1.51
LSM5-205ENST00000409952 GDF15Q99988 308 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 NOL10Q9BSC4 688 aaKnown RBP5.63□□□□□ -1.51
LSM5-205ENST00000409952 TRIM54Q9BYV2 358 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 MANSC1Q9H8J5 431 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 TMEM8AQ9HCN3 771 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 SAYSD1Q9NPB0 183 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 FTSJ1Q9UET6 329 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 NUDT5Q9UKK9 219 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 PCDHA6Q9UN73 950 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 GPR34Q9UPC5 381 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 CCDC196A0A1B0GTZ2 297 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 TCRBV5S2A0A599 114 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 BICDL2A1A5D9 508 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 FAM234BA2RU67 622 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 TRIM43BA6NCK2 446 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 ENDOD1O94919 500 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 MPIG6BO95866 241 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 MT-ND5P03915 603 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 FTH1P19P0C7X4 201 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 MYL4P12829 197 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 MALP21145 153 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 GALNSP34059 522 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 MAN2A2P49641 1150 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 ARFIP2P53365 341 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 NCKAP1LP55160 1127 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 GRIN1Q05586 938 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 DBPQ10586 325 aaPredicted RBP5.62□□□□□ -1.51
LSM5-205ENST00000409952 TARDBPQ13148 414 aaKnown RBP eCLIP5.62□□□□□ -1.51
LSM5-205ENST00000409952 MAPK7Q13164 816 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 KIF22Q14807 665 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 RAB30Q15771 203 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 MEA1Q16626 185 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 ZKSCAN2Q63HK3 967 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 SULT6B1Q6IMI4 303 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 BORAQ6PGQ7 559 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 GADL1Q6ZQY3 521 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 RSPH3Q86UC2 560 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 MIB1Q86YT6 1006 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 TMEM151BQ8IW70 566 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 CELF5Q8N6W0 485 aaKnown RBP5.62□□□□□ -1.51
LSM5-205ENST00000409952 OTUD7AQ8TE49 926 aaPredicted RBP5.62□□□□□ -1.51
LSM5-205ENST00000409952 RFFLQ8WZ73 363 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 HOXB13Q92826 284 aaPredicted RBP5.62□□□□□ -1.51
LSM5-205ENST00000409952 NELL1Q92832 810 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 RAB24Q969Q5 203 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 TRIM43Q96BQ3 446 aaPredicted RBP5.62□□□□□ -1.51
LSM5-205ENST00000409952 EID2BQ96D98 161 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 RRP36Q96EU6 259 aaKnown RBP5.62□□□□□ -1.51
LSM5-205ENST00000409952 HIST1H2AHQ96KK5 128 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 HIST1H2AJQ99878 128 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 KATNAL1Q9BW62 490 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 AP5M1Q9H0R1 490 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 DHX36Q9H2U1 1008 aaKnown RBP5.62□□□□□ -1.51
LSM5-205ENST00000409952 ADAM7Q9H2U9 754 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 NECTIN3Q9NQS3 549 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 UCKL1Q9NWZ5 548 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 IGSF9Q9P2J2 1179 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 SRP68Q9UHB9 627 aaKnown RBP5.62□□□□□ -1.51
LSM5-205ENST00000409952 JAG2Q9Y219 1238 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 PCDHA1Q9Y5I3 950 aa5.62□□□□□ -1.51
LSM5-205ENST00000409952 SGSM2O43147 1006 aa5.61□□□□□ -1.51
LSM5-205ENST00000409952 FAM155BO75949 473 aa5.61□□□□□ -1.51
LSM5-205ENST00000409952 SEC24DO94855 1032 aaPredicted RBP5.61□□□□□ -1.51
LSM5-205ENST00000409952 TNFRSF6BO95407 300 aa5.61□□□□□ -1.51
LSM5-205ENST00000409952 ALOX15P16050 662 aaPredicted RBP5.61□□□□□ -1.51
LSM5-205ENST00000409952 FAHP16930 419 aa5.61□□□□□ -1.51
LSM5-205ENST00000409952 SYN1P17600 705 aa5.61□□□□□ -1.51
LSM5-205ENST00000409952 PFKLP17858 780 aa5.61□□□□□ -1.51
LSM5-205ENST00000409952 MC4RP32245 332 aa5.61□□□□□ -1.51
LSM5-205ENST00000409952 DRG2P55039 364 aaKnown RBP5.61□□□□□ -1.51
LSM5-205ENST00000409952 PFKPQ01813 784 aa5.61□□□□□ -1.51
LSM5-205ENST00000409952 TLE1Q04724 770 aa5.61□□□□□ -1.51
LSM5-205ENST00000409952 FSTL1Q12841 308 aa5.61□□□□□ -1.51
LSM5-205ENST00000409952 SNAPC2Q13487 334 aa5.61□□□□□ -1.51
LSM5-205ENST00000409952 TAF11Q15544 211 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms