RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 ARL13BQ3SXY8 428 aa17.38■□□□□ 0.37
PTPRN2-205ENST00000409483 KIF2BQ8N4N8 673 aa17.38■□□□□ 0.37
PTPRN2-205ENST00000409483 TSEN2Q8NCE0 465 aaKnown RBP17.38■□□□□ 0.37
PTPRN2-205ENST00000409483 OR6J1Q8NGC5 347 aa17.38■□□□□ 0.37
PTPRN2-205ENST00000409483 SMYD3Q9H7B4 428 aa17.38■□□□□ 0.37
PTPRN2-205ENST00000409483 CRLF3Q8IUI8 442 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 TRIM42Q8IWZ5 723 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 FAM71DQ8N9W8 422 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 VIL1P09327 827 aaKnown RBP17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 FGRP09769 529 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 PTGISQ16647 500 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 MDH1BQ5I0G3 518 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 IL31RAQ8NI17 732 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 ASB14A6NK59 587 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 RAP1GAPP47736 663 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 LRIG3Q6UXM1 1119 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 C2orf69Q8N8R5 385 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 RUBCNQ92622 972 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 N4BP2L2Q92802 583 aaPredicted RBP17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 SEMA4AQ9H3S1 761 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 KLK14Q9P0G3 267 aa17.37■□□□□ 0.37
PTPRN2-205ENST00000409483 PPP3CAQ08209 521 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 PCNX4Q63HM2 1172 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 TRAPPC12Q8WVT3 735 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 MYL6P60660 151 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 STAT4Q14765 748 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 SPATA21Q7Z572 469 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 ANKRD63C9JTQ0 380 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 SRGAP2BP0DMP2 458 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 AP3M2P53677 418 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 C3orf62Q6ZUJ4 267 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 SPATA24Q86W54 205 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 PABPC3Q9H361 631 aaKnown RBP17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 HSPA4LO95757 839 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 NUMBP49757 651 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 NPY5RQ15761 445 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 MED15Q96RN5 788 aa17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 XPO7Q9UIA9 1087 aaKnown RBP17.36■□□□□ 0.37
PTPRN2-205ENST00000409483 SUPT20HL2P0C7V6 817 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 CASP2P42575 452 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 EPHB1P54762 984 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 RBP5P82980 135 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 CYP24A1Q07973 514 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 KIAA1841Q6NSI8 718 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 TRMT10CQ7L0Y3 403 aaKnown RBP17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 SLC5A5Q92911 643 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 PPP1R36Q96LQ0 422 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 GBP5Q96PP8 586 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 NUF2Q9BZD4 464 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 DCTN3O75935 186 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 ATG16L1Q676U5 607 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 C1orf186Q6ZWK4 172 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 FASTKD5Q7L8L6 764 aaKnown RBP17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 CCNYL1Q8N7R7 359 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 GBP7Q8N8V2 638 aaPredicted RBP17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 BAP1Q92560 729 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 KRT35Q92764 455 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 NPHS2Q9NP85 383 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 TPX2Q9ULW0 747 aaKnown RBP17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 NRXN3Q9Y4C0 1643 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 LTN1O94822 1766 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 ARFIP2P53365 341 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 LY6KQ17RY6 165 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 NUDCD3Q8IVD9 361 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 C4orf19Q8IY42 314 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 ACTRT1Q8TDG2 376 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 HPDLQ96IR7 371 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 PSD3Q9NYI0 1048 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 APOL1O14791 398 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 PYGMP11217 842 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 CYP2B6P20813 491 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 STAP1Q9ULZ2 295 aa17.35■□□□□ 0.37
PTPRN2-205ENST00000409483 HAUS5O94927 633 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 VTNP04004 478 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 DNAJC3Q13217 504 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 IER5Q5VY09 327 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 CYP4F11Q9HBI6 524 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 RNF19AQ9NV58 838 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 CPSF3Q9UKF6 684 aaKnown RBP17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 VWA5AO00534 786 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 KIAA0391O15091 583 aaKnown RBP17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 CHUKO15111 745 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 DIAPH2O60879 1101 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 RFC5P40937 340 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 NR1H3Q13133 447 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 TSTA3Q13630 321 aaPredicted RBP17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 ICE2Q659A1 982 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 BZW1Q7L1Q6 419 aaKnown RBP17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 WDR75Q8IWA0 830 aaKnown RBP17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 FAM167BQ9BTA0 163 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 KLC4Q9NSK0 619 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.34■□□□□ 0.371e-6■■■□□ 16.7
PTPRN2-205ENST00000409483 GPATCH2LQ9NWQ4 482 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 SPATA31C1P0DKV0 1188 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 PBX1P40424 430 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 POU5F1BQ06416 359 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 PIGHQ14442 188 aaPredicted RBP17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 RNF135Q8IUD6 432 aa17.34■□□□□ 0.37
PTPRN2-205ENST00000409483 LRRC34Q8IZ02 419 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms