RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 HS6ST3Q8IZP7 471 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 DAW1Q8N136 415 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 ZNF687Q8N1G0 1237 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 C4orf32Q8N8J7 132 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 FAM200AQ8TCP9 573 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 ZSWIM3Q96MP5 696 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 PLEKHA5Q9HAU0 1116 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 CEP72Q9P209 647 aa17.44■□□□□ 0.38
VCX3A-201ENST00000381089 TICRRQ7Z2Z1 1910 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 HEPACAM2A8MVW5 462 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 H0YCG3 227 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 CLDN3O15551 220 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 XPOTO43592 962 aaKnown RBP17.43■□□□□ 0.38
VCX3A-201ENST00000381089 LRP3O75074 770 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 TDGF1P13385 188 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 KPNA1P52294 538 aaPredicted RBP17.43■□□□□ 0.38
VCX3A-201ENST00000381089 EPHB3P54753 998 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 NBR1Q14596 966 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 TEAD2Q15562 447 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 ZPBP2Q6X784 338 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 DTHD1Q6ZMT9 781 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 RNF19BQ6ZMZ0 732 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 C1orf186Q6ZWK4 172 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 SPIRE2Q8WWL2 714 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 NTPCRQ9BSD7 190 aaKnown RBP17.43■□□□□ 0.38
VCX3A-201ENST00000381089 RUSC1Q9BVN2 902 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 C8orf33Q9H7E9 229 aaPredicted RBP17.43■□□□□ 0.38
VCX3A-201ENST00000381089 YIPF1Q9Y548 306 aa17.43■□□□□ 0.38
VCX3A-201ENST00000381089 OR6C75A6NL08 312 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 ABLIM1O14639 778 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 OAZ2O95190 189 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 FGF19O95750 216 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 RETP07949 1114 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 PLS3P13797 630 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 GJA1P17302 382 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 CCNE1P24864 410 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 GUCY2CP25092 1073 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 CNR2P34972 360 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 PRPHP41219 470 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 ALDH1A3P47895 512 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 SLC10A6Q3KNW5 377 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 HAUS6Q7Z4H7 955 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 SPEM1Q8N4L4 309 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 KCTD17Q8N5Z5 321 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 NETO1Q8TDF5 533 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 BICD1Q96G01 975 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 ZBTB45Q96K62 511 aaPredicted RBP17.42■□□□□ 0.38
VCX3A-201ENST00000381089 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
VCX3A-201ENST00000381089 TUBGCP4Q9UGJ1 667 aa17.42■□□□□ 0.38
VCX3A-201ENST00000381089 M0QZQ0 153 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 DPYSL4O14531 572 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 CHADO15335 359 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 FOXD2O60548 495 aaPredicted RBP17.41■□□□□ 0.38
VCX3A-201ENST00000381089 MOSPD3O75425 235 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 CLTAP09496 248 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 CHRNB1P11230 501 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 CYP3A5P20815 502 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 PPP2R3AQ06190 1150 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 MCL1Q07820 350 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 SPEM2Q0P670 501 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 MAPK7Q13164 816 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 SIM2Q14190 667 aaPredicted RBP17.41■□□□□ 0.38
VCX3A-201ENST00000381089 ZRSR1Q15695 479 aaKnown RBP17.41■□□□□ 0.38
VCX3A-201ENST00000381089 LPAL2Q16609 132 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 KYAT1Q16773 422 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 DSTYKQ6XUX3 929 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 BEST2Q8NFU1 509 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 SHKBP1Q8TBC3 707 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 KIF12Q96FN5 646 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 CNTNAP3BQ96NU0 1288 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 CNTNAP3Q9BZ76 1288 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 SH2B1Q9NRF2 756 aaPredicted RBP17.41■□□□□ 0.38
VCX3A-201ENST00000381089 KCND2Q9NZV8 630 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 UBQLN1Q9UMX0 589 aaKnown RBP17.41■□□□□ 0.38
VCX3A-201ENST00000381089 ASB3Q9Y575 518 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 PDCD11Q14690 1871 aaKnown RBP17.41■□□□□ 0.38
VCX3A-201ENST00000381089 CACNA1BQ00975 2339 aa17.41■□□□□ 0.38
VCX3A-201ENST00000381089 TPRP12270 2363 aaKnown RBP17.4■□□□□ 0.38
VCX3A-201ENST00000381089 A0A1W2PRU2 124 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 DCDC2BA2VCK2 349 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 SFI1A8K8P3 1242 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 PP2D1A8MPX8 630 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 CXCL8P10145 99 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 TGM1P22735 817 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.38
VCX3A-201ENST00000381089 LRPAP1P30533 357 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 SATB1Q01826 763 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 GPR17Q13304 367 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 SEZ6Q53EL9 994 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 ARHGAP15Q53QZ3 475 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 DGKKQ5KSL6 1271 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.4■□□□□ 0.38
VCX3A-201ENST00000381089 ITIH5Q86UX2 942 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 TMEM161BQ8NDZ6 487 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 CDK5RAP3Q96JB5 506 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 PGLYRP2Q96PD5 576 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 TSPAN18Q96SJ8 248 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 PARD6AQ9NPB6 346 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 LARSQ9P2J5 1176 aaKnown RBP17.4■□□□□ 0.38
VCX3A-201ENST00000381089 PCDHB6Q9Y5E3 794 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms