RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 CNBD2Q96M20 576 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 MCEEQ96PE7 176 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 TUFT1Q9NNX1 390 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 WWOXQ9NZC7 414 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 NCAM1P13591 858 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 ATP1A3P13637 1013 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 ABCD1P33897 745 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 ARID5BQ14865 1188 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 MXD3Q9BW11 206 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 RRN3P2A6NIE6 340 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 NUP62P37198 522 aaPredicted RBP13.01□□□□□ -0.33
CHD3-203ENST00000380358 THPOP40225 353 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 COASYQ13057 564 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 CASP8Q14790 479 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 CEP95Q96GE4 821 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 RHBGQ9H310 441 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 RAB6BQ9NRW1 208 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 DDX56Q9NY93 547 aaKnown RBP13.01□□□□□ -0.33
CHD3-203ENST00000380358 HEATR9A2RTY3 570 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 ENO4A6NNW6 628 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 SYNCRIPO60506 623 aaKnown RBP13.01□□□□□ -0.33
CHD3-203ENST00000380358 PPP6R2O75170 966 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 PMPCBO75439 489 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 FAM107AO95990 144 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 RARS2Q5T160 578 aaKnown RBP13.01□□□□□ -0.33
CHD3-203ENST00000380358 TEDDM1Q5T9Z0 273 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 MACC1Q6ZN28 852 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 CDKL3Q8IVW4 592 aaPredicted RBP13.01□□□□□ -0.33
CHD3-203ENST00000380358 BBS7Q8IWZ6 715 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 ADGRF4Q8IZF3 695 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 OSBP2Q969R2 916 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 TADA1Q96BN2 335 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 MS4A14Q96JA4 679 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 THAP9Q9H5L6 903 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 MAGEF1Q9HAY2 307 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 TRPC4Q9UBN4 977 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 CYP21A2P08686 494 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 GRAPQ13588 217 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 SLC39A14Q15043 492 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 RABGAP1LQ5R372 815 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 CCDC137Q6PK04 289 aaKnown RBP13.01□□□□□ -0.33
CHD3-203ENST00000380358 GRAPLQ8TC17 118 aaPredicted RBP13.01□□□□□ -0.33
CHD3-203ENST00000380358 ROGDIQ9GZN7 287 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 ETNK1Q9HBU6 452 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 LIMA1Q9UHB6 759 aaKnown RBP13.01□□□□□ -0.33
CHD3-203ENST00000380358 CHGBP05060 677 aa13□□□□□ -0.33
CHD3-203ENST00000380358 INPP5AQ14642 412 aa13□□□□□ -0.33
CHD3-203ENST00000380358 NSMCE4AQ9NXX6 385 aa13□□□□□ -0.33
CHD3-203ENST00000380358 XPO7Q9UIA9 1087 aaKnown RBP13□□□□□ -0.33
CHD3-203ENST00000380358 ZC3H11AO75152 810 aaKnown RBP eCLIP13□□□□□ -0.33
CHD3-203ENST00000380358 DLGAP3O95886 979 aa13□□□□□ -0.33
CHD3-203ENST00000380358 GGCXP38435 758 aa13□□□□□ -0.33
CHD3-203ENST00000380358 TAF5Q15542 800 aa13□□□□□ -0.33
CHD3-203ENST00000380358 DUOXA2Q1HG44 320 aa13□□□□□ -0.33
CHD3-203ENST00000380358 CYP4A22Q5TCH4 519 aa13□□□□□ -0.33
CHD3-203ENST00000380358 RHOT2Q8IXI1 618 aa13□□□□□ -0.33
CHD3-203ENST00000380358 MCPH1Q8NEM0 835 aa13□□□□□ -0.33
CHD3-203ENST00000380358 SH3GL2Q99962 352 aa13□□□□□ -0.33
CHD3-203ENST00000380358 EPC1Q9H2F5 836 aa13□□□□□ -0.33
CHD3-203ENST00000380358 NOP53Q9NZM5 478 aaKnown RBP13□□□□□ -0.33
CHD3-203ENST00000380358 H2AFYO75367 372 aaKnown RBP13□□□□□ -0.33
CHD3-203ENST00000380358 CCR4P51679 360 aa13□□□□□ -0.33
CHD3-203ENST00000380358 CAMK2GQ13555 558 aaPredicted RBP13□□□□□ -0.33
CHD3-203ENST00000380358 CUL4AQ13619 759 aa13□□□□□ -0.33
CHD3-203ENST00000380358 GSTA3Q16772 222 aa13□□□□□ -0.33
CHD3-203ENST00000380358 DOK6Q6PKX4 331 aa13□□□□□ -0.33
CHD3-203ENST00000380358 RABGGTAQ92696 567 aa13□□□□□ -0.33
CHD3-203ENST00000380358 THUMPD3Q9BV44 507 aaKnown RBP13□□□□□ -0.33
CHD3-203ENST00000380358 CINPQ9BW66 212 aaPredicted RBP13□□□□□ -0.33
CHD3-203ENST00000380358 DBR1Q9UK59 544 aaKnown RBP13□□□□□ -0.33
CHD3-203ENST00000380358 COQ6Q9Y2Z9 468 aa13□□□□□ -0.33
CHD3-203ENST00000380358 AOX1Q06278 1338 aa13□□□□□ -0.33
CHD3-203ENST00000380358 STIP1P31948 543 aaKnown RBP13□□□□□ -0.33
CHD3-203ENST00000380358 PGM1P36871 562 aa13□□□□□ -0.33
CHD3-203ENST00000380358 NCKAP1LP55160 1127 aa13□□□□□ -0.33
CHD3-203ENST00000380358 PPP1R2P3Q6NXS1 205 aa13□□□□□ -0.33
CHD3-203ENST00000380358 LRRC8BQ6P9F7 803 aa13□□□□□ -0.33
CHD3-203ENST00000380358 SYTL1Q8IYJ3 562 aa13□□□□□ -0.33
CHD3-203ENST00000380358 TTC13Q8NBP0 860 aa13□□□□□ -0.33
CHD3-203ENST00000380358 IL1RAPL1Q9NZN1 696 aa13□□□□□ -0.33
CHD3-203ENST00000380358 SPATA2Q9UM82 520 aa13□□□□□ -0.33
CHD3-203ENST00000380358 CCNE1P24864 410 aa13□□□□□ -0.33
CHD3-203ENST00000380358 QARSP47897 775 aaKnown RBP13□□□□□ -0.33
CHD3-203ENST00000380358 CLK2P49760 499 aaKnown RBP13□□□□□ -0.33
CHD3-203ENST00000380358 ZNF445P59923 1031 aa13□□□□□ -0.33
CHD3-203ENST00000380358 UBE3CQ15386 1083 aa13□□□□□ -0.33
CHD3-203ENST00000380358 GNASQ5JWF2 1037 aa13□□□□□ -0.33
CHD3-203ENST00000380358 R3HCC1LQ7Z5L2 792 aaKnown RBP13□□□□□ -0.33
CHD3-203ENST00000380358 MIB1Q86YT6 1006 aa13□□□□□ -0.33
CHD3-203ENST00000380358 APOBEC3FQ8IUX4 373 aaKnown RBP13□□□□□ -0.33
CHD3-203ENST00000380358 SPRTNQ9H040 489 aaPredicted RBP13□□□□□ -0.33
CHD3-203ENST00000380358 C2orf40Q9H1Z8 148 aa13□□□□□ -0.33
CHD3-203ENST00000380358 ZFYVE28Q9HCC9 887 aa13□□□□□ -0.33
CHD3-203ENST00000380358 WEE2P0C1S8 567 aa13□□□□□ -0.33
CHD3-203ENST00000380358 MBL2P11226 248 aaPredicted RBP13□□□□□ -0.33
CHD3-203ENST00000380358 GUCY1A3Q02108 690 aa13□□□□□ -0.33
CHD3-203ENST00000380358 CHL1O00533 1208 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 PODXLO00592 558 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 TEX33O43247 280 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 DYRK3O43781 588 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms