RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 DLG4P78352 724 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 GPS1Q13098 491 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 TMED2Q15363 201 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 AMHR2Q16671 573 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 FOXR1Q6PIV2 292 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 ZC3H18Q86VM9 953 aaKnown RBP15□□□□□ -0.01
SHROOM1-203ENST00000378679 FAF2Q96CS3 445 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 BTBD6Q96KE9 485 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 PRKAG2Q9UGJ0 569 aa15□□□□□ -0.01
SHROOM1-203ENST00000378679 H3BQF6 201 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 I3L4J1 428 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 LGALS2P05162 132 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 GZMAP12544 262 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 GLRA2P23416 452 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 CYP4A22Q5TCH4 519 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 ARHGEF19Q8IW93 802 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 ASAP3Q8TDY4 903 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 KAT5Q92993 513 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 TINF2Q9BSI4 451 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 TRIM51Q9BSJ1 452 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 PPP1R12CQ9BZL4 782 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 CISHQ9NSE2 258 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 DDX56Q9NY93 547 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 H2AFXP16104 143 aaPredicted RBP14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 NR1D1P20393 614 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 RRM1P23921 792 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 MSH2P43246 934 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 KCNMA1Q12791 1236 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 HP1BP3Q5SSJ5 553 aaPredicted RBP14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 USP38Q8NB14 1042 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 RSRC1Q96IZ7 334 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 OSBPL8Q9BZF1 889 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 CARD9Q9H257 536 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 CPSF3Q9UKF6 684 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 UBQLN1Q9UMX0 589 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 AFG3L2Q9Y4W6 797 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 DHX34Q14147 1143 aaKnown RBP14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 PRPSAP1Q14558 356 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 PLCB4Q15147 1175 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 CCNI2Q6ZMN8 369 aaPredicted RBP14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 RNF180Q86T96 592 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 FEZF2Q8TBJ5 459 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 PPP1R13LQ8WUF5 828 aa14.99□□□□□ -0.01
SHROOM1-203ENST00000378679 NFASCO94856 1347 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 NKRFO15226 690 aaKnown RBP eCLIP14.98□□□□□ -0.016e-8■□□□□ 8.7
SHROOM1-203ENST00000378679 ARHGAP25P42331 645 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 HSDL1Q3SXM5 330 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 PRAMEF19Q5SWL8 479 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 GKAP1Q5VSY0 366 aaPredicted RBP14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 TLK2Q86UE8 772 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 WDR49Q8IV35 697 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 CACNA2D3Q8IZS8 1091 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 SH2D3CQ8N5H7 860 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 DNAJB3Q8WWF6 145 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 FAM118BQ9BPY3 351 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 SIK2Q9H0K1 926 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 SASH3O75995 380 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 KRT14P02533 472 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 GCKP35557 465 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 DCAF4L1Q3SXM0 396 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 GLB1LQ6UWU2 654 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 ATL2Q8NHH9 583 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 COL18A1P39060 1754 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 RNF225M0QZC1 329 aaPredicted RBP14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 DDX3XO00571 662 aaKnown RBP eCLIP14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 RAD51CO43502 376 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 GNL1P36915 607 aaPredicted RBP14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 PPM1FP49593 454 aaPredicted RBP14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 KRT17Q04695 432 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 PIGHQ14442 188 aaPredicted RBP14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 C1orf228Q6PIY5 440 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 DDX42Q86XP3 938 aaKnown RBP eCLIP14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 PGBD4Q96DM1 585 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.98□□□□□ -0.013e-6■□□□□ 11.1
SHROOM1-203ENST00000378679 BTBD7Q9P203 1132 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 ZNF214Q9UL59 606 aaPredicted RBP14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 NUP98P52948 1817 aa14.98□□□□□ -0.01
SHROOM1-203ENST00000378679 LRRIQ3A6PVS8 624 aaPredicted RBP14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 CARSP49589 748 aaKnown RBP14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 PAPD7Q5XG87 772 aaKnown RBP14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 TRIM68Q6AZZ1 485 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 IQSEC1Q6DN90 963 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 WDR59Q6PJI9 974 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 CELF4Q9BZC1 486 aaKnown RBP14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 KLC2Q9H0B6 622 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 FBXL5Q9UKA1 691 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 KBTBD13C9JR72 458 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 LYPLA2O95372 231 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 PSMC4P43686 418 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 TAF6P49848 677 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 PNKPQ96T60 521 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 ZBED2Q9BTP6 218 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 SLC38A7Q9NVC3 462 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 SNCAIPQ9Y6H5 919 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 A0A0U1RQJ8 604 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 B3GAT3O94766 335 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 CPB1P15086 417 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 ARL4CP56559 192 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 ZKSCAN8Q15776 578 aaPredicted RBP14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 SMTNL2Q2TAL5 461 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms