RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 TNFSF13BQ9Y275 285 aa16.24■□□□□ 0.19
CDKN1A-202ENST00000373711 TM4SF5O14894 197 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 ATG13O75143 517 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 MOSPD3O75425 235 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 KCNK5O95279 499 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 MARCKSP29966 332 aaPredicted RBP16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 EPHB3P54753 998 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 ZNF568Q3ZCX4 644 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 XKR4Q5GH76 650 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 SHKBP1Q8TBC3 707 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 BSNDQ8WZ55 320 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 SUSD3Q96L08 255 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 POLR3CQ9BUI4 534 aaPredicted RBP16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 LSM14BQ9BX40 385 aaKnown RBP16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 TM6SF1Q9BZW5 370 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 VPS45Q9NRW7 570 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 YIPF1Q9Y548 306 aa16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.23■□□□□ 0.19
CDKN1A-202ENST00000373711 EML5Q05BV3 1969 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 TMEM8BA6NDV4 472 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 K7ERI5 159 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 KCNE1P15382 129 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 GJA1P17302 382 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 RAP1GAPP47736 663 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 SCRN1Q12765 414 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 NR5A1Q13285 461 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 CCINQ13939 588 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 ARHGAP15Q53QZ3 475 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 EARS2Q5JPH6 523 aaKnown RBP16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 HAUS3Q68CZ6 603 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 RNF43Q68DV7 783 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 UNQ6494/PRO21346Q6UXR6 183 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 CATSPER3Q86XQ3 398 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 DDX12PQ92771 950 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 ACAP3Q96P50 834 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 PDRG1Q9NUG6 133 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 ORC3Q9UBD5 711 aaPredicted RBP16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 SLC8A2Q9UPR5 921 aa16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 ZNF638Q14966 1978 aaKnown RBP16.22■□□□□ 0.19
CDKN1A-202ENST00000373711 A0A087WWV3 80 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 A0A1W2PRU2 124 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 FAM205CA6NFA0 338 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 NRG2O14511 850 aaPredicted RBP16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 EDN1P05305 212 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 SPATA31C1P0DKV0 1188 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 MUTP22033 750 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 IGFBP6P24592 240 aaPredicted RBP16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 MPLP40238 635 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 ALDH1A3P47895 512 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 SOX9P48436 509 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 SOX4Q06945 474 aaPredicted RBP16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 COL9A2Q14055 689 aaPredicted RBP16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 PON2Q15165 354 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 NT5DC1Q5TFE4 455 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 ALKAL1Q6UXT8 129 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 MTMR9Q96QG7 549 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 LARP6Q9BRS8 491 aaKnown RBP16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 MRPL4Q9BYD3 311 aaKnown RBP16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 THG1LQ9NWX6 298 aaKnown RBP16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 PCDHB8Q9UN66 801 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 USP20Q9Y2K6 914 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 ASB3Q9Y575 518 aa16.21■□□□□ 0.19
CDKN1A-202ENST00000373711 NCANO14594 1321 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 MCF2P10911 925 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 RPA1P27694 616 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 OSTNP61366 133 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 YWHAHQ04917 246 aaPredicted RBP16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 TRIM29Q14134 588 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 ACAP1Q15027 740 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 KARSQ15046 597 aaKnown RBP16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 ELF2Q15723 593 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 PLA2G2CQ5R387 149 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 DAB2IPQ5VWQ8 1189 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 PSAPL1Q6NUJ1 521 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 TXNDC11Q6PKC3 985 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 ITIH5Q86UX2 942 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 ARID3BQ8IVW6 561 aaPredicted RBP16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 TNFRSF25Q93038 417 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 EXOC4Q96A65 974 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 KIFC3Q9BVG8 833 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 CDT1Q9H211 546 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 GJB4Q9NTQ9 266 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 CNTN3Q9P232 1028 aa16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 RBM19Q9Y4C8 960 aaKnown RBP16.2■□□□□ 0.18
CDKN1A-202ENST00000373711 NUP205Q92621 2012 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 MYH11P35749 1972 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 MED24O75448 989 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 NOVA1P51513 510 aaKnown RBP16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 AMPD2Q01433 879 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 GRSF1Q12849 480 aaKnown RBP eCLIP16.19■□□□□ 0.182e-6■■□□□ 12.4
CDKN1A-202ENST00000373711 CCDC6Q16204 474 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 ITPRIPL2Q3MIP1 535 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 RNF19BQ6ZMZ0 732 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 USP37Q86T82 979 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 KBTBD6Q86V97 674 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 TMC8Q8IU68 726 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 CAMKK1Q8N5S9 505 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 CEP120Q8N960 986 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 BEST2Q8NFU1 509 aa16.19■□□□□ 0.18
CDKN1A-202ENST00000373711 BPIFB1Q8TDL5 484 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms