RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 GFPT2O94808 682 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 HSPA1AP0DMV8 641 aaKnown RBP10.21□□□□□ -0.77
VTA1-201ENST00000367621 HSPA1BP0DMV9 641 aaKnown RBP10.21□□□□□ -0.77
VTA1-201ENST00000367621 FERP16591 822 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 AKAP5P24588 427 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 CLCN1P35523 988 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 ARHGAP25P42331 645 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 PIK3CAP42336 1068 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 CTCFP49711 727 aaPredicted RBP10.21□□□□□ -0.77
VTA1-201ENST00000367621 ARID5AQ03989 594 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 PTK2Q05397 1052 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 APBB1IPQ7Z5R6 666 aaPredicted RBP10.21□□□□□ -0.77
VTA1-201ENST00000367621 RTN4RL1Q86UN2 441 aaPredicted RBP10.21□□□□□ -0.77
VTA1-201ENST00000367621 CD302Q8IX05 232 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 SLC30A5Q8TAD4 765 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 SPAG5Q96R06 1193 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 EIF3CQ99613 913 aaKnown RBP10.21□□□□□ -0.77
VTA1-201ENST00000367621 CCDC94Q9BW85 323 aaPredicted RBP10.21□□□□□ -0.77
VTA1-201ENST00000367621 HAUS4Q9H6D7 363 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 RNF19AQ9NV58 838 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 NOD1Q9Y239 953 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 DERAQ9Y315 318 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 PCDHB2Q9Y5E7 798 aa10.21□□□□□ -0.77
VTA1-201ENST00000367621 SMIM28A0A1B0GU29 152 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 FAM187AA6NFU0 413 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 ZNF623O75123 536 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 ABL1P00519 1130 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 TNNC2P02585 160 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 CFHP08603 1231 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 TMEM191BP0C7N4 346 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 KCNE1P15382 129 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 ATF7P17544 494 aaPredicted RBP10.2□□□□□ -0.78
VTA1-201ENST00000367621 CHRNB2P17787 502 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 KIF11P52732 1056 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 MFAP3P55082 362 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 NOP14P78316 857 aaKnown RBP10.2□□□□□ -0.78
VTA1-201ENST00000367621 CYP27A1Q02318 531 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 KLHL30Q0D2K2 578 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 NFX1Q12986 1120 aaKnown RBP10.2□□□□□ -0.78
VTA1-201ENST00000367621 CUL2Q13617 745 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 TMEM132DQ14C87 1099 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 PKN2Q16513 984 aaKnown RBP10.2□□□□□ -0.78
VTA1-201ENST00000367621 SGSM1Q2NKQ1 1148 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 WDR44Q5JSH3 913 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
VTA1-201ENST00000367621 C1orf53Q5VUE5 145 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 SLC39A5Q6ZMH5 540 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 ENOSF1Q7L5Y1 443 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 ANKRD33Q7Z3H0 272 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 METTL3Q86U44 580 aaKnown RBP10.2□□□□□ -0.78
VTA1-201ENST00000367621 NT5DC4Q86YG4 428 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 PPM1KQ8N3J5 372 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 GSTCDQ8NEC7 633 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 CAGE1Q8TC20 777 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 DIS3LQ8TF46 1054 aaKnown RBP10.2□□□□□ -0.78
VTA1-201ENST00000367621 LINC01599Q8WXQ3 324 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 C18orf25Q96B23 403 aaPredicted RBP10.2□□□□□ -0.78
VTA1-201ENST00000367621 ANKRD36BP1Q96IX9 119 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 VRTNQ9H8Y1 702 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 CNTN6Q9UQ52 1028 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 BZW2Q9Y6E2 419 aaKnown RBP10.2□□□□□ -0.78
VTA1-201ENST00000367621 BRCA2P51587 3418 aa10.2□□□□□ -0.78
VTA1-201ENST00000367621 TRIP12Q14669 1992 aaPredicted RBP10.19□□□□□ -0.78
VTA1-201ENST00000367621 A0A087X0T9 212 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 DDX3XO00571 662 aaKnown RBP eCLIP10.19□□□□□ -0.785e-15■■■■□ 20.3
VTA1-201ENST00000367621 PTGESO14684 152 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 PPEF2O14830 753 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 FANCGO15287 622 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 CYP26A1O43174 497 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 NBNO60934 754 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 PHACTR2O75167 634 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 STAU1O95793 577 aaKnown RBP10.19□□□□□ -0.78
VTA1-201ENST00000367621 TFRCP02786 760 aaKnown RBP10.19□□□□□ -0.78
VTA1-201ENST00000367621 ITGB3P05106 788 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 FAM228BP0C875 321 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 SELPP16109 830 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 ANXA13P27216 316 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 CYLC1P35663 651 aaPredicted RBP10.19□□□□□ -0.78
VTA1-201ENST00000367621 ASPAP45381 313 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 GJA8P48165 433 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 AFF1P51825 1210 aaKnown RBP10.19□□□□□ -0.78
VTA1-201ENST00000367621 ZNF132P52740 706 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 FAM189BP81408 668 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 GFPT1Q06210 699 aaPredicted RBP10.19□□□□□ -0.78
VTA1-201ENST00000367621 SOX4Q06945 474 aaPredicted RBP10.19□□□□□ -0.78
VTA1-201ENST00000367621 PAK2Q13177 524 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 NAB2Q15742 525 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 TCTN1Q2MV58 587 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 TWF2Q6IBS0 349 aaKnown RBP10.19□□□□□ -0.78
VTA1-201ENST00000367621 AGMOQ6ZNB7 445 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 ZNF662Q6ZS27 426 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 USP38Q8NB14 1042 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 LNX1Q8TBB1 728 aaPredicted RBP10.19□□□□□ -0.78
VTA1-201ENST00000367621 SLC20A1Q8WUM9 679 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 DDX1Q92499 740 aaKnown RBP10.19□□□□□ -0.78
VTA1-201ENST00000367621 TAF4BQ92750 862 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 JAKMIP2Q96AA8 810 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 CCDC42Q96M95 316 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 TSPAN18Q96SJ8 248 aa10.19□□□□□ -0.78
VTA1-201ENST00000367621 APOL6Q9BWW8 343 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms