RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 RIC1Q4ADV7 1423 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 M0QYV0 167 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 EFHC2Q5JST6 749 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 RGS9BPQ6ZS82 235 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 CALB2P22676 271 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 KCNQ4P56696 695 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 LAMB3Q13751 1172 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 ATP8B4Q8TF62 1192 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 SYNPO2Q9UMS6 1093 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 NFX1Q12986 1120 aaKnown RBP12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 GIT2Q14161 759 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 TFDP3Q5H9I0 405 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 ZNF571Q7Z3V5 609 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 BEST2Q8NFU1 509 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 GMCL1Q96IK5 515 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 C9orf72Q96LT7 481 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 EEF1DP29692 281 aaKnown RBP12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 TBC1D10BQ4KMP7 808 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 NIF3L1Q9GZT8 377 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 TRPV6Q9H1D0 765 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 EHD2Q9NZN4 543 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 GADL1Q6ZQY3 521 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 GMCL1P1Q8NEA9 526 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 C3orf62Q6ZUJ4 267 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 TTLL6Q8N841 843 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 FBXO25Q8TCJ0 367 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 DUSP9Q99956 384 aaKnown RBP12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 XPO7Q9UIA9 1087 aaKnown RBP12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 TBX20Q9UMR3 447 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 ACTL7BQ9Y614 415 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 ROBO3Q96MS0 1386 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 CYP11B1P15538 503 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 GARTP22102 1010 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 DSG1Q02413 1049 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 TRIM67Q6ZTA4 783 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 PHACTR1Q9C0D0 580 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 TMEM117Q9H0C3 514 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 GSTA4O15217 222 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 CDO1Q16878 200 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 RBBP8NLQ8NC74 664 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 PBXIP1Q96AQ6 731 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 THAP2Q9H0W7 228 aa12.39□□□□□ -0.43
CDC42BPA-202ENST00000366764 MMP10P09238 476 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 EFTUD2Q15029 972 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 THNSL1Q8IYQ7 743 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 FEZF2Q8TBJ5 459 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 TMC2Q8TDI7 906 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 SYNJ2BP-COX16A0A087WUM0 186 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 NFIXQ14938 502 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 FSD1LQ9BXM9 530 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 ING2Q9H160 280 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 COX16Q9P0S2 106 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 PRR12Q9ULL5 1215 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 ABCC6O95255 1503 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 PSMD3O43242 534 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 CNTFP26441 200 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 EPHB1P54762 984 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 ADRM1Q16186 407 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 CCNG2Q16589 344 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 RPL26L1Q9UNX3 145 aaKnown RBP12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 FAM205AQ6ZU69 1335 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 GNGT2O14610 69 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 MSH4O15457 936 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 CAND2O75155 1236 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 RALAP11233 206 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 L3MBTL1Q9Y468 752 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 APRTP07741 180 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 IL10P22301 178 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 HDAC4P56524 1084 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 SATB1Q01826 763 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 OCA2Q04671 838 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 TMED1Q13445 227 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 WASHC2DQ5SRD0 308 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 C7orf31Q8N865 590 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 SIK3Q9Y2K2 1263 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 N4BP2Q86UW6 1770 aaPredicted RBP12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 CITO14578 2027 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 SERPINB10P48595 397 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 TTC16Q8NEE8 873 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 MCEEQ96PE7 176 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 HACD3Q9P035 362 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 LRCH1Q9Y2L9 728 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 AKAP3O75969 853 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 PBX1P40424 430 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 C1QBPQ07021 282 aaKnown RBP12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 LVRNQ6Q4G3 990 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
CDC42BPA-202ENST00000366764 ACTR2P61160 394 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 BOLA3Q53S33 107 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 TSPAN17Q96FV3 270 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 MRPL1Q9BYD6 325 aaKnown RBP12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 VPS11Q9H270 941 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 CCDC134Q9H6E4 229 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 SLC24A3Q9HC58 644 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 GRID1Q9ULK0 1009 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 FOXN3O00409 490 aaPredicted RBP12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 MXRA8Q9BRK3 442 aa12.37□□□□□ -0.43
CDC42BPA-202ENST00000366764 RUSC1Q9BVN2 902 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms