RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 SUSD3Q96L08 255 aa17.37■□□□□ 0.37
IFT20-202ENST00000357896 OXCT2Q9BYC2 517 aaPredicted RBP17.37■□□□□ 0.37
IFT20-202ENST00000357896 VPS45Q9NRW7 570 aa17.37■□□□□ 0.37
IFT20-202ENST00000357896 GJB4Q9NTQ9 266 aa17.37■□□□□ 0.37
IFT20-202ENST00000357896 C2orf42Q9NWW7 574 aa17.37■□□□□ 0.37
IFT20-202ENST00000357896 ZZEF1O43149 2961 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 A0A1W2PRU2 124 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 ARHGEF35A5YM69 484 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 FAM205CA6NFA0 338 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 K7ERI5 159 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 ATG13O75143 517 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 CPB1P15086 417 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 KCNE1P15382 129 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 MARCKSP29966 332 aaPredicted RBP17.36■□□□□ 0.37
IFT20-202ENST00000357896 NR5A1Q13285 461 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 PON2Q15165 354 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 WDR44Q5JSH3 913 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 RNF43Q68DV7 783 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 KBTBD6Q86V97 674 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 ARID3BQ8IVW6 561 aaPredicted RBP17.36■□□□□ 0.37
IFT20-202ENST00000357896 KDF1Q8NAX2 398 aaPredicted RBP17.36■□□□□ 0.37
IFT20-202ENST00000357896 ZC3H10Q96K80 434 aaKnown RBP17.36■□□□□ 0.37
IFT20-202ENST00000357896 MTMR9Q96QG7 549 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 POLR3CQ9BUI4 534 aaPredicted RBP17.36■□□□□ 0.37
IFT20-202ENST00000357896 GTSE1Q9NYZ3 720 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 ZMIZ1Q9ULJ6 1067 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 NCANO14594 1321 aa17.36■□□□□ 0.37
IFT20-202ENST00000357896 GREB1Q4ZG55 1949 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 FGF19O95750 216 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 MCM4P33991 863 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 MPLP40238 635 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 EPHB3P54753 998 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 PLCB2Q00722 1185 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 SCRN1Q12765 414 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 ACAP1Q15027 740 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 PTPAQ15257 358 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 PSAPL1Q6NUJ1 521 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 RNF19BQ6ZMZ0 732 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 TTC8Q8TAM2 541 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 ERMNQ8TAM6 284 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 DDX12PQ92771 950 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 KIFAP3Q92845 792 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 ZMAT2Q96NC0 199 aaKnown RBP17.35■□□□□ 0.37
IFT20-202ENST00000357896 KIFC3Q9BVG8 833 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 TM6SF1Q9BZW5 370 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 OBP2AQ9NY56 170 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 TPCN1Q9ULQ1 816 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 SLC8A2Q9UPR5 921 aa17.35■□□□□ 0.37
IFT20-202ENST00000357896 C1QTNF9BB2RNN3 333 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 EXTL3O43909 919 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 C1QTNF9P0C862 333 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 ALDH1A3P47895 512 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 OSTNP61366 133 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 ZNF568Q3ZCX4 644 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 CAMKK1Q8N5S9 505 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 BEST2Q8NFU1 509 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 TNFRSF25Q93038 417 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 TBC1D32Q96NH3 1257 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 ACAP3Q96P50 834 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 LRRC3Q9BY71 257 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 THG1LQ9NWX6 298 aaKnown RBP17.34■□□□□ 0.37
IFT20-202ENST00000357896 PCDHB8Q9UN66 801 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 YIPF1Q9Y548 306 aa17.34■□□□□ 0.37
IFT20-202ENST00000357896 SPEGQ15772 3267 aa17.33■□□□□ 0.37
IFT20-202ENST00000357896 TMEM8BA6NDV4 472 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 EPB41L2O43491 1005 aaKnown RBP17.33■□□□□ 0.36
IFT20-202ENST00000357896 MED24O75448 989 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 PXNP49023 591 aaPredicted RBP17.33■□□□□ 0.36
IFT20-202ENST00000357896 NOVA1P51513 510 aaKnown RBP17.33■□□□□ 0.36
IFT20-202ENST00000357896 ITPRIPL2Q3MIP1 535 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 ARHGAP15Q53QZ3 475 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 SKAP1Q86WV1 359 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 TMC8Q8IU68 726 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 CEP120Q8N960 986 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 ZFYVE19Q96K21 471 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 TMEM209Q96SK2 561 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 ACO2Q99798 780 aaKnown RBP17.33■□□□□ 0.36
IFT20-202ENST00000357896 CDT1Q9H211 546 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 PDRG1Q9NUG6 133 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 CNTN3Q9P232 1028 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 ORC3Q9UBD5 711 aaPredicted RBP17.33■□□□□ 0.36
IFT20-202ENST00000357896 ASB3Q9Y575 518 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 LAMA1P25391 3075 aa17.33■□□□□ 0.36
IFT20-202ENST00000357896 PHLPP2Q6ZVD8 1323 aa17.32■□□□□ 0.36
IFT20-202ENST00000357896 OAZ2O95190 189 aa17.32■□□□□ 0.36
IFT20-202ENST00000357896 RPA1P27694 616 aa17.32■□□□□ 0.36
IFT20-202ENST00000357896 YWHAHQ04917 246 aaPredicted RBP17.32■□□□□ 0.36
IFT20-202ENST00000357896 GRSF1Q12849 480 aaKnown RBP eCLIP17.32■□□□□ 0.36
IFT20-202ENST00000357896 DAB2IPQ5VWQ8 1189 aa17.32■□□□□ 0.36
IFT20-202ENST00000357896 GPIHBP1Q8IV16 184 aa17.32■□□□□ 0.36
IFT20-202ENST00000357896 C18orf25Q96B23 403 aaPredicted RBP17.32■□□□□ 0.36
IFT20-202ENST00000357896 LRRC3BQ96PB8 259 aa17.32■□□□□ 0.36
IFT20-202ENST00000357896 TCHPQ9BT92 498 aa17.32■□□□□ 0.36
IFT20-202ENST00000357896 MRPL4Q9BYD3 311 aaKnown RBP17.32■□□□□ 0.36
IFT20-202ENST00000357896 ATXN3LQ9H3M9 355 aa17.32■□□□□ 0.36
IFT20-202ENST00000357896 PTPRHQ9HD43 1115 aa17.32■□□□□ 0.36
IFT20-202ENST00000357896 PDCD11Q14690 1871 aaKnown RBP17.32■□□□□ 0.36
IFT20-202ENST00000357896 RHOBTB1O94844 696 aa17.31■□□□□ 0.36
IFT20-202ENST00000357896 MCF2P10911 925 aa17.31■□□□□ 0.36
IFT20-202ENST00000357896 MUTP22033 750 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms