RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 NFASCO94856 1347 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 IL1BP01584 269 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 EPHB2P29323 1055 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 STAT3P40763 770 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 KCNJ1P48048 391 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 SNRPFP62306 86 aaKnown RBP11.29□□□□□ -0.6
CAPN3-205ENST00000357568 KRT72Q14CN4 511 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 CCDC142Q17RM4 750 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 CTC1Q2NKJ3 1217 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 PPP1R15BQ5SWA1 713 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 RINT1Q6NUQ1 792 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 NOP9Q86U38 636 aaKnown RBP11.29□□□□□ -0.6
CAPN3-205ENST00000357568 FAM71AQ8IYT1 594 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 PPFIBP2Q8ND30 876 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 SLC20A1Q8WUM9 679 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 FGD4Q96M96 766 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 SYNCQ9H7C4 482 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 PARVGQ9HBI0 331 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 DLGAP2Q9P1A6 1054 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 ZFP69BQ9UJL9 534 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 VAV3Q9UKW4 847 aa11.29□□□□□ -0.6
CAPN3-205ENST00000357568 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.29□□□□□ -0.6
CAPN3-205ENST00000357568 POLR2AP24928 1970 aaKnown RBP11.29□□□□□ -0.6
CAPN3-205ENST00000357568 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
CAPN3-205ENST00000357568 A0A1W2PRG0 241 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 TCP10L2B9ZVM9 353 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 EML1O00423 815 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 TOMM70O94826 608 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 TJP3O95049 919 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
CAPN3-205ENST00000357568 CETPP11597 493 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 SREBF1P36956 1147 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 ARHGAP4P98171 946 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 FSTL1Q12841 308 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 CCNG2Q16589 344 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 DAB2IPQ5VWQ8 1189 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 C1orf186Q6ZWK4 172 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 ARHGAP24Q8N264 748 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 PTPRN2Q92932 1015 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 LENG9Q96B70 501 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 BTBD10Q9BSF8 475 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 NUP85Q9BW27 656 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 STRA6Q9BX79 667 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 DDX4Q9NQI0 724 aaKnown RBP11.28□□□□□ -0.6
CAPN3-205ENST00000357568 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-205ENST00000357568 RPS6KL1Q9Y6S9 549 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 LOXHD1Q8IVV2 1947 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 TRPM7Q96QT4 1865 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 TMEM110-MUSTN1A8MSY1 372 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 RSPH10B2B2RC85 870 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 F8W8V4 182 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 PDHA1P08559 390 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 CYP3A4P08684 503 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 RSPH10BP0C881 870 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 MAPTP10636 758 aaKnown RBP11.28□□□□□ -0.6
CAPN3-205ENST00000357568 CHRNB2P17787 502 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 NFIAQ12857 509 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 LAMB3Q13751 1172 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 RASA3Q14644 834 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 CCDC6Q16204 474 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 SNX30Q5VWJ9 437 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 NLRP9Q7RTR0 991 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 ZNF720Q7Z2F6 126 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 ARHGAP22Q7Z5H3 698 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 CLNKQ7Z7G1 428 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 EPS8L1Q8TE68 723 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 SMC6Q96SB8 1091 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 FIZ1Q96SL8 496 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 DEFB129Q9H1M3 183 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 BHMT2Q9H2M3 363 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 VCX3BQ9H321 246 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 VCX3AQ9NNX9 186 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 MLXIPLQ9NP71 852 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 GPCPD1Q9NPB8 672 aa11.28□□□□□ -0.6
CAPN3-205ENST00000357568 RFC5P40937 340 aa11.27□□□□□ -0.6
CAPN3-205ENST00000357568 DNAJC3Q13217 504 aa11.27□□□□□ -0.6
CAPN3-205ENST00000357568 ARHGAP44Q17R89 818 aa11.27□□□□□ -0.6
CAPN3-205ENST00000357568 SUPT20HL1Q3ZLR7 823 aa11.27□□□□□ -0.6
CAPN3-205ENST00000357568 LRRC74BQ6ZQY2 392 aa11.27□□□□□ -0.6
CAPN3-205ENST00000357568 FAM47EQ6ZV65 393 aa11.27□□□□□ -0.6
CAPN3-205ENST00000357568 TTC8Q8TAM2 541 aa11.27□□□□□ -0.6
CAPN3-205ENST00000357568 PTCD3Q96EY7 689 aaKnown RBP11.27□□□□□ -0.6
CAPN3-205ENST00000357568 TRABDQ9H4I3 376 aa11.27□□□□□ -0.6
CAPN3-205ENST00000357568 SIPA1L1O43166 1804 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 CLDN3O15551 220 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 TYROBPO43914 113 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 TGDSO95455 350 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 PENKP01210 267 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-205ENST00000357568 MYBL1P10243 752 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 DLATP10515 647 aaKnown RBP11.27□□□□□ -0.61
CAPN3-205ENST00000357568 ADCY8P40145 1251 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 SLC17A8Q8NDX2 589 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 TRIM11Q96F44 468 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 IWS1Q96ST2 819 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 PCDHB18PQ96TA0 734 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 EIF2AK1Q9BQI3 630 aaKnown RBP11.27□□□□□ -0.61
CAPN3-205ENST00000357568 UBE2TQ9NPD8 197 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-205ENST00000357568 ANKFY1Q9P2R3 1169 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 ANGPTL2Q9UKU9 493 aa11.27□□□□□ -0.61
CAPN3-205ENST00000357568 TBC1D12O60347 775 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms