RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ZNF394Q53GI3 561 aa21.34■■□□□ 1.01
RTN1-202ENST00000342503 ZNF667Q5HYK9 610 aa21.34■■□□□ 1.01
RTN1-202ENST00000342503 SLC27A1Q6PCB7 646 aa21.34■■□□□ 1.01
RTN1-202ENST00000342503 TRIM11Q96F44 468 aa21.34■■□□□ 1.01
RTN1-202ENST00000342503 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.34■■□□□ 1.01
RTN1-202ENST00000342503 AVENQ9NQS1 362 aaPredicted RBP21.34■■□□□ 1.01
RTN1-202ENST00000342503 PGRMC1O00264 195 aaKnown RBP21.33■■□□□ 1.01
RTN1-202ENST00000342503 MYBL1P10243 752 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 COMTP21964 271 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 MCM3P25205 808 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 RAP1GAPP47736 663 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 GUCY2FP51841 1108 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 GJA9P57773 515 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 YWHAEP62258 255 aaKnown RBP21.33■■□□□ 1.01
RTN1-202ENST00000342503 MRPS25P82663 173 aaKnown RBP21.33■■□□□ 1.01
RTN1-202ENST00000342503 BEND6Q5SZJ8 279 aaPredicted RBP21.33■■□□□ 1.01
RTN1-202ENST00000342503 DCAF12L1Q5VU92 463 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 MON1BQ7L1V2 547 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 APBB1IPQ7Z5R6 666 aaPredicted RBP21.33■■□□□ 1.01
RTN1-202ENST00000342503 C7orf31Q8N865 590 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 HDAC7Q8WUI4 952 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 RPS6KC1Q96S38 1066 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 EIF2AQ9BY44 585 aaKnown RBP21.33■■□□□ 1.01
RTN1-202ENST00000342503 TMEM59LQ9UK28 342 aa21.33■■□□□ 1.01
RTN1-202ENST00000342503 NOC2LQ9Y3T9 749 aaKnown RBP21.33■■□□□ 1.01
RTN1-202ENST00000342503 SPDYE4A6NLX3 237 aa21.32■■□□□ 1
RTN1-202ENST00000342503 ZMYND10O75800 440 aa21.32■■□□□ 1
RTN1-202ENST00000342503 EIF4BP23588 611 aaKnown RBP21.32■■□□□ 1
RTN1-202ENST00000342503 RRM1P23921 792 aa21.32■■□□□ 1
RTN1-202ENST00000342503 BRD2P25440 801 aaKnown RBP21.32■■□□□ 1
RTN1-202ENST00000342503 HOXC8P31273 242 aa21.32■■□□□ 1
RTN1-202ENST00000342503 ATICP31939 592 aa21.32■■□□□ 1
RTN1-202ENST00000342503 PCBP1Q15365 356 aaKnown RBP eCLIP21.32■■□□□ 1
RTN1-202ENST00000342503 WDR72Q3MJ13 1102 aa21.32■■□□□ 1
RTN1-202ENST00000342503 NOTUMQ6P988 496 aa21.32■■□□□ 1
RTN1-202ENST00000342503 PHLDB2Q86SQ0 1253 aa21.32■■□□□ 1
RTN1-202ENST00000342503 CD302Q8IX05 232 aa21.32■■□□□ 1
RTN1-202ENST00000342503 BCO2Q9BYV7 579 aa21.32■■□□□ 1
RTN1-202ENST00000342503 SNTG2Q9NY99 539 aa21.32■■□□□ 1
RTN1-202ENST00000342503 C2CD2Q9Y426 696 aa21.32■■□□□ 1
RTN1-202ENST00000342503 MIF4GDA9UHW6 222 aaKnown RBP21.32■■□□□ 1
RTN1-202ENST00000342503 ATP8B1O43520 1251 aa21.32■■□□□ 1
RTN1-202ENST00000342503 KPNA6O60684 536 aa21.32■■□□□ 1
RTN1-202ENST00000342503 AOC2O75106 756 aa21.32■■□□□ 1
RTN1-202ENST00000342503 GNAT1P11488 350 aa21.32■■□□□ 1
RTN1-202ENST00000342503 POLR2BP30876 1174 aaKnown RBP21.32■■□□□ 1
RTN1-202ENST00000342503 SLC7A5Q01650 507 aa21.32■■□□□ 1
RTN1-202ENST00000342503 PRKCZQ05513 592 aa21.32■■□□□ 1
RTN1-202ENST00000342503 SNX17Q15036 470 aa21.32■■□□□ 1
RTN1-202ENST00000342503 C2CD6Q53TS8 623 aa21.32■■□□□ 1
RTN1-202ENST00000342503 SMYD5Q6GMV2 418 aa21.32■■□□□ 1
RTN1-202ENST00000342503 C8orf74Q6P047 294 aa21.32■■□□□ 1
RTN1-202ENST00000342503 LLGL2Q6P1M3 1020 aa21.32■■□□□ 1
RTN1-202ENST00000342503 NT5DC4Q86YG4 428 aa21.32■■□□□ 1
RTN1-202ENST00000342503 PHF13Q86YI8 300 aaPredicted RBP21.32■■□□□ 1
RTN1-202ENST00000342503 TMEM40Q8WWA1 233 aa21.32■■□□□ 1
RTN1-202ENST00000342503 KIF12Q96FN5 646 aa21.32■■□□□ 1
RTN1-202ENST00000342503 ZSWIM1Q9BR11 485 aa21.32■■□□□ 1
RTN1-202ENST00000342503 C11orf70Q9BRQ4 267 aa21.32■■□□□ 1
RTN1-202ENST00000342503 SDCBP2Q9H190 292 aa21.32■■□□□ 1
RTN1-202ENST00000342503 DPP3Q9NY33 737 aa21.32■■□□□ 1
RTN1-202ENST00000342503 DMGDHQ9UI17 866 aaKnown RBP21.32■■□□□ 1
RTN1-202ENST00000342503 AGAP1Q9UPQ3 857 aa21.32■■□□□ 1
RTN1-202ENST00000342503 TRIM32Q13049 653 aa21.31■■□□□ 1
RTN1-202ENST00000342503 GLE1Q53GS7 698 aaKnown RBP21.31■■□□□ 1
RTN1-202ENST00000342503 GNASQ5JWF2 1037 aa21.31■■□□□ 1
RTN1-202ENST00000342503 CPNE8Q86YQ8 564 aa21.31■■□□□ 1
RTN1-202ENST00000342503 ALG3Q92685 438 aa21.31■■□□□ 1
RTN1-202ENST00000342503 FAXDC2Q96IV6 333 aa21.31■■□□□ 1
RTN1-202ENST00000342503 KRT12Q99456 494 aa21.31■■□□□ 1
RTN1-202ENST00000342503 MTG1Q9BT17 334 aaPredicted RBP21.31■■□□□ 1
RTN1-202ENST00000342503 CARD9Q9H257 536 aa21.31■■□□□ 1
RTN1-202ENST00000342503 CXCL16Q9H2A7 254 aa21.31■■□□□ 1
RTN1-202ENST00000342503 VRTNQ9H8Y1 702 aa21.31■■□□□ 1
RTN1-202ENST00000342503 FAM53CQ9NYF3 392 aa21.31■■□□□ 1
RTN1-202ENST00000342503 OGFRQ9NZT2 677 aa21.31■■□□□ 1
RTN1-202ENST00000342503 ADAM22Q9P0K1 906 aa21.31■■□□□ 1
RTN1-202ENST00000342503 ITGA11Q9UKX5 1188 aa21.31■■□□□ 1
RTN1-202ENST00000342503 PDCD11Q14690 1871 aaKnown RBP21.31■■□□□ 1
RTN1-202ENST00000342503 AXLP30530 894 aa21.3■■□□□ 1
RTN1-202ENST00000342503 CDH8P55286 799 aa21.3■■□□□ 1
RTN1-202ENST00000342503 LIN9Q5TKA1 542 aa21.3■■□□□ 1
RTN1-202ENST00000342503 PPP1R2P3Q6NXS1 205 aa21.3■■□□□ 1
RTN1-202ENST00000342503 NME8Q8N427 588 aa21.3■■□□□ 1
RTN1-202ENST00000342503 UBL4BQ8N7F7 174 aa21.3■■□□□ 1
RTN1-202ENST00000342503 RUBCNQ92622 972 aa21.3■■□□□ 1
RTN1-202ENST00000342503 KRT35Q92764 455 aa21.3■■□□□ 1
RTN1-202ENST00000342503 HPDLQ96IR7 371 aa21.3■■□□□ 1
RTN1-202ENST00000342503 VCPIP1Q96JH7 1222 aa21.3■■□□□ 1
RTN1-202ENST00000342503 HINFPQ9BQA5 517 aa21.3■■□□□ 1
RTN1-202ENST00000342503 AP1M1Q9BXS5 423 aa21.3■■□□□ 1
RTN1-202ENST00000342503 UPF3AQ9H1J1 476 aaKnown RBP21.3■■□□□ 1
RTN1-202ENST00000342503 SMYD3Q9H7B4 428 aa21.3■■□□□ 1
RTN1-202ENST00000342503 TTC7AQ9ULT0 858 aaPredicted RBP21.3■■□□□ 1
RTN1-202ENST00000342503 CASP8AP2Q9UKL3 1982 aa21.3■■□□□ 1
RTN1-202ENST00000342503 SCN10AQ9Y5Y9 1956 aa21.3■■□□□ 1
RTN1-202ENST00000342503 SASH3O75995 380 aa21.29■■□□□ 1
RTN1-202ENST00000342503 PGK1P00558 417 aa21.29■■□□□ 1
RTN1-202ENST00000342503 MARCKSL1P49006 195 aa21.29■■□□□ 1
RTN1-202ENST00000342503 CRYBB1P53674 252 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms