RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CCL5P13501 91 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 ATP2A2P16615 1042 aaKnown RBP12.53□□□□□ -0.4
HDAC6-201ENST00000334136 EIF4BP23588 611 aaKnown RBP12.53□□□□□ -0.4
HDAC6-201ENST00000334136 ARPP19P56211 112 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 LRRC14Q15048 493 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 ZNF699Q32M78 642 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 SEZ6Q53EL9 994 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 AP1ARQ63HQ0 302 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 ZNF449Q6P9G9 518 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 PHLDB2Q86SQ0 1253 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 DDX42Q86XP3 938 aaKnown RBP eCLIP12.53□□□□□ -0.4
HDAC6-201ENST00000334136 SCFD1Q8WVM8 642 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 CPB2Q96IY4 423 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 SPATS2LQ9NUQ6 558 aaKnown RBP12.53□□□□□ -0.4
HDAC6-201ENST00000334136 MAFBQ9Y5Q3 323 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-201ENST00000334136 TCHHQ07283 1943 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 DNAJC25-GNG10A0A024R161 153 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 MOXD2PA6NHM9 499 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 DHX15O43143 795 aaKnown RBP12.53□□□□□ -0.4
HDAC6-201ENST00000334136 RASSF2P50749 326 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 AP3M2P53677 418 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 TAF11Q15544 211 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 DCAF4L1Q3SXM0 396 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 MPZL3Q6UWV2 235 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 FAM47EQ6ZV65 393 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 ZNF473Q8WTR7 871 aaKnown RBP12.53□□□□□ -0.4
HDAC6-201ENST00000334136 FAM167BQ9BTA0 163 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 Q9Y3F1 56 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 EXTL3O43909 919 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 HUS1O60921 280 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 BAG2O95816 211 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 MAPTP10636 758 aaKnown RBP12.52□□□□□ -0.4
HDAC6-201ENST00000334136 GLRA2P23416 452 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 PDE6CP51160 858 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 ACLYP53396 1101 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 CUL1Q13616 776 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 MORN1Q5T089 497 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 LIN9Q5TKA1 542 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 OR6B3Q8NGW1 331 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 ASAP3Q8TDY4 903 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 CDY2AQ9Y6F7 541 aa12.52□□□□□ -0.4
HDAC6-201ENST00000334136 ACKR2O00590 384 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 CIB2O75838 187 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 EDNRBP24530 442 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 PPP2R2AP63151 447 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 TMEM132DQ14C87 1099 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 KAZNQ674X7 775 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 PPP1R21Q6ZMI0 780 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 KCNV2Q8TDN2 545 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 PXYLP1Q8TE99 480 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 CBWD1Q9BRT8 395 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 HAUS2Q9NVX0 235 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 USP20Q9Y2K6 914 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 MROH7Q68CQ1 1323 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 STAG3L1P0CL83 205 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 MDH1P40925 334 aaKnown RBP12.52□□□□□ -0.41
HDAC6-201ENST00000334136 PKN2Q16513 984 aaKnown RBP12.52□□□□□ -0.41
HDAC6-201ENST00000334136 DCUN1D2Q6PH85 259 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 PACS2Q86VP3 889 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 CTAGE3PQ8IX95 158 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 KLK14Q9P0G3 267 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 NR2E3Q9Y5X4 410 aa12.52□□□□□ -0.41
HDAC6-201ENST00000334136 SLC16A3O15427 465 aaKnown RBP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 RASIP1Q5U651 963 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 PARP9Q8IXQ6 854 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 FBXL13Q8NEE6 735 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 MKNK1Q9BUB5 465 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 CELF4Q9BZC1 486 aaKnown RBP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 UNC93B1Q9H1C4 597 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 CNOT10Q9H9A5 744 aaKnown RBP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 CD248Q9HCU0 757 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 SAGE1Q9NXZ1 904 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 ADAMTSL1Q8N6G6 1762 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 SSC5DA1L4H1 1573 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 LRRD1A4D1F6 860 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 TREHO43280 583 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 GJB1P08034 283 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 FERP16591 822 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 GARTP22102 1010 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 CCL23P55773 120 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 TAPT1Q6NXT6 567 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 DNAJC19Q96DA6 116 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 RNPC3Q96LT9 517 aaKnown RBP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 RILPQ96NA2 401 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 RAB3IPQ96QF0 476 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 EPN3Q9H201 632 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 AGAP1Q9UPQ3 857 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 COL1A2P08123 1366 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 IL18RAPO95256 599 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 MRPS6P82932 125 aaKnown RBP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 KIAA0895Q8NCT3 520 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 RUNDC3BQ96NL0 473 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 NIFKQ9BYG3 293 aaKnown RBP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 DDX60LQ5H9U9 1706 aaKnown RBP12.51□□□□□ -0.41
HDAC6-201ENST00000334136 ITIH6Q6UXX5 1313 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 PAPPA2Q9BXP8 1791 aa12.51□□□□□ -0.41
HDAC6-201ENST00000334136 SART1O43290 800 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms