RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 STXBP5LQ9Y2K9 1186 aa17.87■□□□□ 0.45
CLCF1-201ENST00000312438 CES2O00748 559 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 THAP12O43422 761 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 MTA2O94776 668 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 KIF4AO95239 1232 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 STAU1O95793 577 aaKnown RBP17.86■□□□□ 0.45
CLCF1-201ENST00000312438 MYCNP04198 464 aaPredicted RBP17.86■□□□□ 0.45
CLCF1-201ENST00000312438 POLR2BP30876 1174 aaKnown RBP17.86■□□□□ 0.45
CLCF1-201ENST00000312438 RBM10P98175 930 aaKnown RBP17.86■□□□□ 0.45
CLCF1-201ENST00000312438 ITIH3Q06033 890 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 ARHGEF6Q15052 776 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 CCDC181Q5TID7 509 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 ALKAL1Q6UXT8 129 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 ZNF572Q7Z3I7 529 aaPredicted RBP17.86■□□□□ 0.45
CLCF1-201ENST00000312438 NT5DC3Q86UY8 548 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 TRIM11Q96F44 468 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 HPDLQ96IR7 371 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 SNX27Q96L92 541 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 TSPAN18Q96SJ8 248 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 CYP3A43Q9HB55 503 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 UVRAGQ9P2Y5 699 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 PACSIN2Q9UNF0 486 aaPredicted RBP17.86■□□□□ 0.45
CLCF1-201ENST00000312438 TRPV2Q9Y5S1 764 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 KAT6AQ92794 2004 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 FAM170AA1A519 330 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 PDE2AO00408 941 aaPredicted RBP17.86■□□□□ 0.45
CLCF1-201ENST00000312438 MYBL1P10243 752 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 NSFP46459 744 aaKnown RBP17.86■□□□□ 0.45
CLCF1-201ENST00000312438 CENPCQ03188 943 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 ZBTB6Q15916 424 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 CFAP221Q4G0U5 840 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 RNF180Q86T96 592 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 MCOLN2Q8IZK6 566 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 ZNF653Q96CK0 615 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 PBKQ96KB5 322 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 FAM124BQ9H5Z6 455 aaPredicted RBP17.86■□□□□ 0.45
CLCF1-201ENST00000312438 POLIQ9UNA4 740 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 HES2Q9Y543 173 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 CDY2AQ9Y6F7 541 aa17.86■□□□□ 0.45
CLCF1-201ENST00000312438 CABYRO75952 493 aa17.85■□□□□ 0.45
CLCF1-201ENST00000312438 UBXN11Q5T124 520 aa17.85■□□□□ 0.45
CLCF1-201ENST00000312438 CPA5Q8WXQ8 436 aa17.85■□□□□ 0.45
CLCF1-201ENST00000312438 VCPIP1Q96JH7 1222 aa17.85■□□□□ 0.45
CLCF1-201ENST00000312438 GOLPH3Q9H4A6 298 aa17.85■□□□□ 0.45
CLCF1-201ENST00000312438 CNTN3Q9P232 1028 aa17.85■□□□□ 0.45
CLCF1-201ENST00000312438 CNOT8Q9UFF9 292 aaKnown RBP17.85■□□□□ 0.45
CLCF1-201ENST00000312438 NOC2LQ9Y3T9 749 aaKnown RBP17.85■□□□□ 0.45
CLCF1-201ENST00000312438 MYO1EQ12965 1108 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 ZNF394Q53GI3 561 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 NAA35Q5VZE5 725 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 C11orf63Q6NUN7 778 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 SCARA5Q6ZMJ2 495 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 FAM228AQ86W67 206 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 BEST2Q8NFU1 509 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 HES6Q96HZ4 224 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 SELENOOQ9BVL4 669 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 NUP85Q9BW27 656 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 NXF3Q9H4D5 531 aaKnown RBP17.84■□□□□ 0.45
CLCF1-201ENST00000312438 ALG6Q9Y672 507 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 KCNK3O14649 394 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 RECQL4O94761 1208 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 PAEPP09466 180 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 GUCY2FP51841 1108 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 TTC39CQ8N584 583 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 ZNF784Q8NCA9 323 aaPredicted RBP17.84■□□□□ 0.45
CLCF1-201ENST00000312438 ZMAT2Q96NC0 199 aaKnown RBP17.84■□□□□ 0.45
CLCF1-201ENST00000312438 ZNF518BQ9C0D4 1074 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 AVENQ9NQS1 362 aaPredicted RBP17.84■□□□□ 0.45
CLCF1-201ENST00000312438 CHST12Q9NRB3 414 aa17.84■□□□□ 0.45
CLCF1-201ENST00000312438 FKTNO75072 461 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 RPS6KA5O75582 802 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 LSM8O95777 96 aaKnown RBP17.83■□□□□ 0.44
CLCF1-201ENST00000312438 CFHP08603 1231 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 ZSCAN20P17040 1043 aaPredicted RBP17.83■□□□□ 0.44
CLCF1-201ENST00000312438 AKAP5P24588 427 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 DNA2P51530 1060 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 CDH8P55286 799 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 NOMO3P69849 1222 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 PTGISQ16647 500 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 XKR4Q5GH76 650 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 MTERF4Q7Z6M4 381 aaKnown RBP17.83■□□□□ 0.44
CLCF1-201ENST00000312438 PHF13Q86YI8 300 aaPredicted RBP17.83■□□□□ 0.44
CLCF1-201ENST00000312438 NOA1Q8NC60 698 aaKnown RBP17.83■□□□□ 0.44
CLCF1-201ENST00000312438 SPATA4Q8NEY3 305 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 ZNF564Q8TBZ8 553 aaPredicted RBP17.83■□□□□ 0.44
CLCF1-201ENST00000312438 RPS6KC1Q96S38 1066 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 PARD6BQ9BYG5 372 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 EPC1Q9H2F5 836 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 PARP2Q9UGN5 583 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 UBQLN1Q9UMX0 589 aaKnown RBP17.83■□□□□ 0.44
CLCF1-201ENST00000312438 PCDHGC3Q9UN70 934 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 GRIN2DO15399 1336 aa17.83■□□□□ 0.44
CLCF1-201ENST00000312438 MED7O43513 233 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 CHRNA1P02708 482 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 TUBBP07437 444 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 H2AFXP16104 143 aaPredicted RBP17.82■□□□□ 0.44
CLCF1-201ENST00000312438 PRMT2P55345 433 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 TNNC1P63316 161 aa17.82■□□□□ 0.44
CLCF1-201ENST00000312438 PTPN11Q06124 597 aaPredicted RBP17.82■□□□□ 0.44
CLCF1-201ENST00000312438 ITGA7Q13683 1181 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms