RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 NEU2Q9Y3R4 380 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 TIMM13Q9Y5L4 95 aaPredicted RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 MYH4Q9Y623 1939 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 TBX3O15119 743 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 RGL2O15211 777 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 HUS1O60921 280 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 BANF1O75531 89 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 UPP2O95045 317 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 AKAP5P24588 427 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 SDC4P31431 198 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 RARRES1P49788 294 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 HIF1AQ16665 826 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 SV2AQ7L0J3 742 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 HACE1Q8IYU2 909 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 SENP7Q9BQF6 1050 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 SARS2Q9NP81 518 aaKnown RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 SIK3Q9Y2K2 1263 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 TMEM120BA0PK00 339 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 A6NNZ2 444 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 COPEO14579 308 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 PPP1R37O75864 691 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 CALB1P05937 261 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 ARL4CP56559 192 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 TMEM132DQ14C87 1099 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 PCSK7Q16549 785 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 TUBB8Q3ZCM7 444 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 Q4G0T1 1027 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 C3orf62Q6ZUJ4 267 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 PACS2Q86VP3 889 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 KIRREL3Q8IZU9 778 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 BBOF1Q8ND07 529 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 SLC5A5Q92911 643 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 CCDC124Q96CT7 223 aaKnown RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 PGBD4Q96DM1 585 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 RAB3IPQ96QF0 476 aaPredicted RBP5.05□□□□□ -1.6
UBR1-201ENST00000290650 ERP44Q9BS26 406 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 SALL4Q9UJQ4 1053 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 USH1CQ9Y6N9 552 aa5.05□□□□□ -1.6
UBR1-201ENST00000290650 NEMP1O14524 444 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 EIF3DO15371 548 aaKnown RBP eCLIP5.04□□□□□ -1.6
UBR1-201ENST00000290650 DIAPH2O60879 1101 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 VIL1P09327 827 aaKnown RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 ALDH18A1P54886 795 aaKnown RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 DNAJC3Q13217 504 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 GOLGA7BQ2TAP0 167 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 DCAF6Q58WW2 860 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 PRAMEF19Q5SWL8 479 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 GMCL1Q96IK5 515 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 RBM41Q96IZ5 413 aaKnown RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 SEMA4AQ9H3S1 761 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 ANKRD12Q6UB98 2062 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 IGSF9BQ9UPX0 1349 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 GIPC1O14908 333 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 EXTL3O43909 919 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 TBXAS1P24557 533 aaPredicted RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 COILP38432 576 aaPredicted RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 IL1RL1Q01638 556 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 KDSRQ06136 332 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 NSUN2Q08J23 767 aaKnown RBP eCLIP5.04□□□□□ -1.6
UBR1-201ENST00000290650 SPARCL1Q14515 664 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 ATP13A4Q4VNC1 1196 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 MEI1Q5TIA1 1274 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 PAPD7Q5XG87 772 aaKnown RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 PHLDB3Q6NSJ2 640 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 ATP8B4Q8TF62 1192 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 SEPT1Q8WYJ6 367 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 CHMP6Q96FZ7 201 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 SEC16BQ96JE7 1060 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 EPN3Q9H201 632 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 ASNSD1Q9NWL6 643 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 PSD3Q9NYI0 1048 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 ASTN1O14525 1302 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 ZNF263O14978 683 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 SHBGP04278 402 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 SPATA31C1P0DKV0 1188 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 SULT1E1P49888 294 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 EPHB1P54762 984 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 EIF3BP55884 814 aaKnown RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 CUL2Q13617 745 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 BYSLQ13895 437 aaKnown RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 CROCCP2Q86T23 111 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 CCDC60Q8IWA6 550 aaPredicted RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 CDKL2Q92772 493 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 APOL2Q9BQE5 337 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 SLITRK6Q9H5Y7 841 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 ETNK1Q9HBU6 452 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 CD248Q9HCU0 757 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 RAB21Q9UL25 225 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 RIPK3Q9Y572 518 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 YDJCA8MPS7 323 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 VWA5AO00534 786 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 TRPA1O75762 1119 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 ESRRAP11474 423 aaPredicted RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 ACAD10Q6JQN1 1059 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 SH3BP5LQ7L8J4 393 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 NOP9Q86U38 636 aaKnown RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 GMCL1P1Q8NEA9 526 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 RBM46Q8TBY0 533 aaKnown RBP5.04□□□□□ -1.6
UBR1-201ENST00000290650 ADAM32Q8TC27 787 aa5.04□□□□□ -1.6
UBR1-201ENST00000290650 RNF139Q8WU17 664 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms