RNA–Protein interactions for RNA: ENST00000272902.9

SUMF1-201, Transcript of sulfatase modifying factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMF1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-201ENST00000272902 PDCD11Q14690 1871 aaKnown RBP23.51■■□□□ 1.35
SUMF1-201ENST00000272902 CEP350Q5VT06 3117 aa23.51■■□□□ 1.35
SUMF1-201ENST00000272902 POLR2BP30876 1174 aaKnown RBP23.51■■□□□ 1.35
SUMF1-201ENST00000272902 CRYBB1P53674 252 aaPredicted RBP23.51■■□□□ 1.35
SUMF1-201ENST00000272902 TCEAL1Q15170 157 aa23.51■■□□□ 1.35
SUMF1-201ENST00000272902 ZNF667Q5HYK9 610 aa23.51■■□□□ 1.35
SUMF1-201ENST00000272902 GDF6Q6KF10 455 aaPredicted RBP23.51■■□□□ 1.35
SUMF1-201ENST00000272902 ZNF572Q7Z3I7 529 aaPredicted RBP23.51■■□□□ 1.35
SUMF1-201ENST00000272902 TAF4BQ92750 862 aa23.51■■□□□ 1.35
SUMF1-201ENST00000272902 KIF12Q96FN5 646 aa23.51■■□□□ 1.35
SUMF1-201ENST00000272902 GTF3C4Q9UKN8 822 aa23.51■■□□□ 1.35
SUMF1-201ENST00000272902 CYP1A2P05177 515 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 C2CD6Q53TS8 623 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 REM2Q8IYK8 340 aaPredicted RBP23.5■■□□□ 1.35
SUMF1-201ENST00000272902 NME8Q8N427 588 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 ZNF606Q8WXB4 792 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 PNKPQ96T60 521 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 NUP85Q9BW27 656 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 AMFRQ9UKV5 643 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 SCN1AP35498 2009 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 CLCN6P51797 869 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 CDH8P55286 799 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 RNASE9P60153 205 aaKnown RBP23.5■■□□□ 1.35
SUMF1-201ENST00000272902 TUBB4BP68371 445 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 FAM47CQ5HY64 1035 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 SPATA4Q8NEY3 305 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 WNT8BQ93098 351 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 HES6Q96HZ4 224 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 ZMAT2Q96NC0 199 aaKnown RBP23.5■■□□□ 1.35
SUMF1-201ENST00000272902 TRIM6Q9C030 488 aaPredicted RBP23.5■■□□□ 1.35
SUMF1-201ENST00000272902 SDCBP2Q9H190 292 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 DPP3Q9NY33 737 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 AGAP1Q9UPQ3 857 aa23.5■■□□□ 1.35
SUMF1-201ENST00000272902 THSD7BQ9C0I4 1608 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 ASGR1P07306 291 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 PAFAH1B1P43034 410 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 NKX3-2P78367 333 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 CENPCQ03188 943 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 TAF2Q6P1X5 1199 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 APBB1IPQ7Z5R6 666 aaPredicted RBP23.49■■□□□ 1.35
SUMF1-201ENST00000272902 MCOLN2Q8IZK6 566 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 MSANTD4Q8NCY6 345 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 ZSWIM1Q9BR11 485 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 BCO2Q9BYV7 579 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 RNF19AQ9NV58 838 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 CNOT8Q9UFF9 292 aaKnown RBP23.49■■□□□ 1.35
SUMF1-201ENST00000272902 SRRDQ9UH36 339 aa23.49■■□□□ 1.35
SUMF1-201ENST00000272902 AXLP30530 894 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 NOMO3P69849 1222 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 KCNA10Q16322 511 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 CFAP221Q4G0U5 840 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 ZNF564Q8TBZ8 553 aaPredicted RBP23.48■■□□□ 1.35
SUMF1-201ENST00000272902 BTBD6Q96KE9 485 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 SNX27Q96L92 541 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 APOL6Q9BWW8 343 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 CELF4Q9BZC1 486 aaKnown RBP23.48■■□□□ 1.35
SUMF1-201ENST00000272902 SMYD3Q9H7B4 428 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 MTA2O94776 668 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 AKAP5P24588 427 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 BRD2P25440 801 aaKnown RBP23.48■■□□□ 1.35
SUMF1-201ENST00000272902 NSFP46459 744 aaKnown RBP23.48■■□□□ 1.35
SUMF1-201ENST00000272902 APLP1P51693 650 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 LLGL2Q6P1M3 1020 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 PHLDB2Q86SQ0 1253 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 CD302Q8IX05 232 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 ITGA11Q9UKX5 1188 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 ALG6Q9Y672 507 aa23.48■■□□□ 1.35
SUMF1-201ENST00000272902 TMEM110-MUSTN1A8MSY1 372 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 GLRA4Q5JXX5 417 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 HPDLQ96IR7 371 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 PLEKHA5Q9HAU0 1116 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 RECQL4O94761 1208 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 ATICP31939 592 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 YARSP54577 528 aaKnown RBP23.47■■□□□ 1.35
SUMF1-201ENST00000272902 MESDQ14696 234 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 UBXN11Q5T124 520 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 MON1BQ7L1V2 547 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 NT5DC4Q86YG4 428 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 KLHDC9Q8NEP7 349 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 TFAP2BQ92481 460 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 CFHR5Q9BXR6 569 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 RNF14Q9UBS8 474 aa23.47■■□□□ 1.35
SUMF1-201ENST00000272902 NOC2LQ9Y3T9 749 aaKnown RBP23.47■■□□□ 1.35
SUMF1-201ENST00000272902 RRM1P23921 792 aa23.46■■□□□ 1.35
SUMF1-201ENST00000272902 MRPS6P82932 125 aaKnown RBP23.46■■□□□ 1.35
SUMF1-201ENST00000272902 ITIH3Q06033 890 aa23.46■■□□□ 1.35
SUMF1-201ENST00000272902 DMTNQ08495 405 aa23.46■■□□□ 1.35
SUMF1-201ENST00000272902 ORC1Q13415 861 aa23.46■■□□□ 1.35
SUMF1-201ENST00000272902 C11orf63Q6NUN7 778 aa23.46■■□□□ 1.35
SUMF1-201ENST00000272902 TRIM72Q6ZMU5 477 aa23.46■■□□□ 1.35
SUMF1-201ENST00000272902 FAM228AQ86W67 206 aa23.46■■□□□ 1.35
SUMF1-201ENST00000272902 VRTNQ9H8Y1 702 aa23.46■■□□□ 1.35
SUMF1-201ENST00000272902 RBM12Q9NTZ6 932 aaKnown RBP23.46■■□□□ 1.35
SUMF1-201ENST00000272902 CDY2AQ9Y6F7 541 aa23.46■■□□□ 1.35
SUMF1-201ENST00000272902 DDX3YO15523 660 aaKnown RBP23.45■■□□□ 1.35
SUMF1-201ENST00000272902 RBP5P82980 135 aa23.45■■□□□ 1.35
SUMF1-201ENST00000272902 CCSAPQ6IQ19 270 aaPredicted RBP23.45■■□□□ 1.35
SUMF1-201ENST00000272902 ALKAL1Q6UXT8 129 aa23.45■■□□□ 1.35
SUMF1-201ENST00000272902 PBKQ96KB5 322 aa23.45■■□□□ 1.35
SUMF1-201ENST00000272902 C11orf70Q9BRQ4 267 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms