RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 PIK3CAP42336 1068 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 FMO5P49326 533 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 TMPRSS15P98073 1019 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 GJB7Q6PEY0 223 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 ETNPPLQ8TBG4 499 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 C18orf8Q96DM3 657 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 SPATC1LQ9H0A9 340 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 SEMA4AQ9H3S1 761 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 SMG5Q9UPR3 1016 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 PCDHGC5Q9Y5F6 944 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 UNCXA6NJT0 531 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 H7C0C1 242 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 CCDC22O60826 627 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 RTN2O75298 545 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 TJP3O95049 919 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 BRD2P25440 801 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 ATP5OP48047 213 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 DNAJC3Q13217 504 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 RRP1BQ14684 758 aaKnown RBP12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 COBLL1Q53SF7 1204 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 RNF25Q96BH1 459 aaPredicted RBP12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 C17orf75Q9HAS0 396 aa12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 GBA2Q9HCG7 927 aaPredicted RBP12.19□□□□□ -0.46
CLSTN3-201ENST00000266546 TNS1Q9HBL0 1735 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 EMSYQ7Z589 1322 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 GOLGA8SH3BPF8 625 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 GOLGA8MH3BSY2 632 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 EPHB6O15197 1021 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 VAMP7P51809 220 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 ARL4CP56559 192 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 AP2B1P63010 937 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 MTERF2Q49AM1 385 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 ATG16L1Q676U5 607 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 SWSAP1Q6NVH7 229 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 FOXR2Q6PJQ5 311 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 RIOX2Q8IUF8 465 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 ZBED8Q8IZ13 594 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 C4orf33Q8N1A6 199 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 OPTNQ96CV9 577 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 RBM15Q96T37 977 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 ADAM33Q9BZ11 813 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 KIAA1586Q9HCI6 787 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 NPHS2Q9NP85 383 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 ANKFY1Q9P2R3 1169 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 O00370 1275 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 OPLAHO14841 1288 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 USP2O75604 605 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 TARSP26639 723 aaKnown RBP12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 PGM1P36871 562 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 RINT1Q6NUQ1 792 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 C4orf19Q8IY42 314 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 MED15Q96RN5 788 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 OSGEPQ9NPF4 335 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 AIPL1Q9NZN9 384 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 CCL15-CCL14A0A0B4J2E2 113 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 CES2O00748 559 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 TAL1P17542 331 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 PON1P27169 355 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 ERFP50548 548 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 KCNMA1Q12791 1236 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 GPS1Q13098 491 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 PDE1CQ14123 709 aaPredicted RBP12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 DBN1Q16643 649 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 CCL15Q16663 113 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 SLFN12LQ6IEE8 588 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 DNAJC24Q6P3W2 148 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 EEPD1Q7L9B9 569 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 SEPT1Q8WYJ6 367 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 SHISA4Q96DD7 197 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 NUDT12Q9BQG2 462 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 UBN1Q9NPG3 1134 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 ADAM22Q9P0K1 906 aa12.18□□□□□ -0.46
CLSTN3-201ENST00000266546 SPDYE5A6NIY4 337 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 COPEO14579 308 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 PSMD10O75832 226 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 MYBP10242 640 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 TGFB3P10600 412 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 COILP38432 576 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 PDIA2Q13087 525 aaKnown RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 TMED1Q13445 227 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 MIIPQ5JXC2 388 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 SYDE1Q6ZW31 735 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 CYFIP1Q7L576 1253 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 CRLF3Q8IUI8 442 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 RNF169Q8NCN4 708 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 THAP2Q9H0W7 228 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 A1CFQ9NQ94 594 aaKnown RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 KLRC4O43908 158 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 TOM1L1O75674 476 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 TRPA1O75762 1119 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 PTENP60484 403 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 IFI35P80217 286 aaPredicted RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 SH3D19Q5HYK7 790 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 RFX6Q8HWS3 928 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 RBM41Q96IZ5 413 aaKnown RBP12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 OLFM3Q96PB7 478 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 MKNK1Q9BUB5 465 aa12.17□□□□□ -0.46
CLSTN3-201ENST00000266546 KIAA0391O15091 583 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms