RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 MTFR1LQ9H019 292 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.02■□□□□ 0.486e-11■■■■□ 19.8
SRF-201ENST00000265354 APOBEC2Q9Y235 224 aaKnown RBP18.02■□□□□ 0.48
SRF-201ENST00000265354 GJA3Q9Y6H8 435 aa18.02■□□□□ 0.48
SRF-201ENST00000265354 MYL2P10916 166 aa18.02■□□□□ 0.47
SRF-201ENST00000265354 AP2B1P63010 937 aa18.02■□□□□ 0.47
SRF-201ENST00000265354 ASPHQ12797 758 aa18.02■□□□□ 0.47
SRF-201ENST00000265354 GRAMD4Q6IC98 578 aa18.02■□□□□ 0.47
SRF-201ENST00000265354 FAM71DQ8N9W8 422 aa18.02■□□□□ 0.47
SRF-201ENST00000265354 TMEM35BQ8NCS4 154 aa18.02■□□□□ 0.47
SRF-201ENST00000265354 TMEM143Q96AN5 459 aa18.02■□□□□ 0.47
SRF-201ENST00000265354 NUF2Q9BZD4 464 aa18.02■□□□□ 0.47
SRF-201ENST00000265354 RAB6BQ9NRW1 208 aa18.02■□□□□ 0.47
SRF-201ENST00000265354 SMG5Q9UPR3 1016 aaKnown RBP18.02■□□□□ 0.47
SRF-201ENST00000265354 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.02■□□□□ 0.47
SRF-201ENST00000265354 RPA3P35244 121 aaPredicted RBP18.01■□□□□ 0.47
SRF-201ENST00000265354 VHLP40337 213 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 PSMC1P62191 440 aaKnown RBP18.01■□□□□ 0.47
SRF-201ENST00000265354 ARHGAP27Q6ZUM4 889 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 ACER1Q8TDN7 264 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 ATP6V0A1Q93050 837 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 PCMTD2Q9NV79 361 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 TPD52P55327 224 aaPredicted RBP18.01■□□□□ 0.47
SRF-201ENST00000265354 NFX1Q12986 1120 aaKnown RBP18.01■□□□□ 0.47
SRF-201ENST00000265354 PTK7Q13308 1070 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 MROH9Q5TGP6 573 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 TTC27Q6P3X3 843 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 RSPH3Q86UC2 560 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 LRRC57Q8N9N7 239 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 DNAAF3Q8N9W5 541 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 NSL1Q96IY1 281 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 TUBB6Q9BUF5 446 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 COG5Q9UP83 839 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 H0YIN7 160 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 TCN1P20061 433 aaPredicted RBP18.01■□□□□ 0.47
SRF-201ENST00000265354 SERPINB3P29508 390 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 CYTH1Q15438 398 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 SLC27A3Q5K4L6 730 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 CHADLQ6NUI6 762 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 LRRC6Q86X45 466 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 MCUQ8NE86 351 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 TRIM56Q9BRZ2 755 aaKnown RBP18.01■□□□□ 0.47
SRF-201ENST00000265354 UNC45AQ9H3U1 944 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 POLLQ9UGP5 575 aa18.01■□□□□ 0.47
SRF-201ENST00000265354 CNOT7Q9UIV1 285 aaKnown RBP18.01■□□□□ 0.47
SRF-201ENST00000265354 SLITRK3O94933 977 aa18■□□□□ 0.47
SRF-201ENST00000265354 LCA5LO95447 670 aa18■□□□□ 0.47
SRF-201ENST00000265354 MTMR2Q13614 643 aa18■□□□□ 0.47
SRF-201ENST00000265354 MMEL1Q495T6 779 aa18■□□□□ 0.47
SRF-201ENST00000265354 ATG16L1Q676U5 607 aa18■□□□□ 0.47
SRF-201ENST00000265354 AGBL1Q96MI9 1066 aa18■□□□□ 0.47
SRF-201ENST00000265354 XPO7Q9UIA9 1087 aaKnown RBP18■□□□□ 0.47
SRF-201ENST00000265354 ASTN1O14525 1302 aa18■□□□□ 0.47
SRF-201ENST00000265354 PECAM1P16284 738 aaPredicted RBP18■□□□□ 0.47
SRF-201ENST00000265354 CALB2P22676 271 aa18■□□□□ 0.47
SRF-201ENST00000265354 EIF3EP60228 445 aaKnown RBP18■□□□□ 0.47
SRF-201ENST00000265354 HEXIM2Q96MH2 286 aaKnown RBP18■□□□□ 0.47
SRF-201ENST00000265354 RBAKQ9NYW8 714 aaPredicted RBP18■□□□□ 0.47
SRF-201ENST00000265354 CASQ2O14958 399 aaPredicted RBP18■□□□□ 0.47
SRF-201ENST00000265354 BGNP21810 368 aa18■□□□□ 0.47
SRF-201ENST00000265354 ALDH1B1P30837 517 aa18■□□□□ 0.47
SRF-201ENST00000265354 PRKCIP41743 596 aa18■□□□□ 0.47
SRF-201ENST00000265354 PTDSS1P48651 473 aaKnown RBP18■□□□□ 0.47
SRF-201ENST00000265354 CDH6P55285 790 aa18■□□□□ 0.47
SRF-201ENST00000265354 TFDP1Q14186 410 aa18■□□□□ 0.47
SRF-201ENST00000265354 KPNB1Q14974 876 aaKnown RBP18■□□□□ 0.47
SRF-201ENST00000265354 ACAD10Q6JQN1 1059 aa18■□□□□ 0.47
SRF-201ENST00000265354 PRPF39Q86UA1 669 aaKnown RBP18■□□□□ 0.47
SRF-201ENST00000265354 CXorf38Q8TB03 319 aa18■□□□□ 0.47
SRF-201ENST00000265354 PRPF31Q8WWY3 499 aaKnown RBP18■□□□□ 0.47
SRF-201ENST00000265354 NLRP4Q96MN2 994 aa18■□□□□ 0.47
SRF-201ENST00000265354 DCLRE1BQ9H816 532 aa18■□□□□ 0.47
SRF-201ENST00000265354 TUFT1Q9NNX1 390 aa18■□□□□ 0.47
SRF-201ENST00000265354 PRPSAP2O60256 369 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 TNNC2P02585 160 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 KLHL38Q2WGJ6 581 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 PRR5LQ6MZQ0 368 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 CKAP2Q8WWK9 683 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 RANBP17Q9H2T7 1088 aaKnown RBP17.99■□□□□ 0.47
SRF-201ENST00000265354 ZC3H4Q9UPT8 1303 aaKnown RBP17.99■□□□□ 0.47
SRF-201ENST00000265354 NEMP1O14524 444 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 DKC1O60832 514 aaKnown RBP eCLIP17.99■□□□□ 0.477e-60■■■■■ 92.3
SRF-201ENST00000265354 RBP3P10745 1247 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 CCDC14Q49A88 953 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 SESTD1Q86VW0 696 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 GALNT4Q8N4A0 578 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 TRIML2Q8N7C3 387 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 TCP10LQ8TDR4 215 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 KCNH7Q9NS40 1196 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 UNC5CO95185 931 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 CACNA2D1P54289 1103 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 SV2AQ7L0J3 742 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 STK32AQ8WU08 396 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 RNF34Q969K3 372 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 LRGUKQ96M69 825 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 RNPEPL1Q9HAU8 725 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 FAM208AQ9UK61 1670 aaKnown RBP17.99■□□□□ 0.47
SRF-201ENST00000265354 DDTLA6NHG4 134 aaPredicted RBP17.99■□□□□ 0.47
SRF-201ENST00000265354 RBAK-RBAKDNI3L0D1 243 aa17.99■□□□□ 0.47
SRF-201ENST00000265354 TGFB1I1O43294 461 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms