RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 RTN2O75298 545 aa20.21■□□□□ 0.83
TRIM47-201ENST00000254816 INHAP05111 366 aa20.21■□□□□ 0.83
TRIM47-201ENST00000254816 CST5P28325 142 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-201ENST00000254816 POLR2BP30876 1174 aaKnown RBP20.21■□□□□ 0.83
TRIM47-201ENST00000254816 CXCR5P32302 372 aa20.21■□□□□ 0.83
TRIM47-201ENST00000254816 ASPAP45381 313 aa20.21■□□□□ 0.83
TRIM47-201ENST00000254816 DNA2P51530 1060 aa20.21■□□□□ 0.83
TRIM47-201ENST00000254816 POU5F1Q01860 360 aaKnown RBP20.21■□□□□ 0.83
TRIM47-201ENST00000254816 TPCN2Q8NHX9 752 aa20.21■□□□□ 0.83
TRIM47-201ENST00000254816 ZBTB9Q96C00 473 aa20.21■□□□□ 0.83
TRIM47-201ENST00000254816 TLR10Q9BXR5 811 aa20.21■□□□□ 0.83
TRIM47-201ENST00000254816 FUT8Q9BYC5 575 aa20.21■□□□□ 0.83
TRIM47-201ENST00000254816 RNF216Q9NWF9 866 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-201ENST00000254816 ATMINO43313 823 aaPredicted RBP20.2■□□□□ 0.82
TRIM47-201ENST00000254816 AXLP30530 894 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 GNA15P30679 374 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 BRD3Q15059 726 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 TERF2Q15554 542 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 WDR72Q3MJ13 1102 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 GLRA4Q5JXX5 417 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 UBXN11Q5T124 520 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 SERINC5Q86VE9 423 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 PXYLP1Q8TE99 480 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 CISHQ9NSE2 258 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 DPP3Q9NY33 737 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 SNX12Q9UMY4 172 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 AGAP1Q9UPQ3 857 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 CNTN6Q9UQ52 1028 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 NCANO14594 1321 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 A0A0A6YYK5 440 aaPredicted RBP20.2■□□□□ 0.82
TRIM47-201ENST00000254816 M0QZ92 97 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 APBB1IPQ7Z5R6 666 aaPredicted RBP20.2■□□□□ 0.82
TRIM47-201ENST00000254816 SNX27Q96L92 541 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 MMS19Q96T76 1030 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 OSBPL7Q9BZF2 842 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 RNF39Q9H2S5 420 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 KLK14Q9P0G3 267 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 TRPV2Q9Y5S1 764 aa20.2■□□□□ 0.82
TRIM47-201ENST00000254816 RECQL4O94761 1208 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 CHRNA1P02708 482 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 GZMAP12544 262 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 CDH8P55286 799 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 VSNL1P62760 191 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 PTGISQ16647 500 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 ZNF667Q5HYK9 610 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 ZNF771Q7L3S4 317 aaPredicted RBP20.19■□□□□ 0.82
TRIM47-201ENST00000254816 RNF180Q86T96 592 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 PASD1Q8IV76 773 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 PCSK9Q8NBP7 692 aaKnown RBP20.19■□□□□ 0.82
TRIM47-201ENST00000254816 RFFLQ8WZ73 363 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 COG5Q9UP83 839 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 C2CD2Q9Y426 696 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 POLR3GO15318 223 aaPredicted RBP20.19■□□□□ 0.82
TRIM47-201ENST00000254816 ATP8B1O43520 1251 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 YARSP54577 528 aaKnown RBP20.19■□□□□ 0.82
TRIM47-201ENST00000254816 BPIFB4P59827 614 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 CLEC16AQ2KHT3 1053 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 COG1Q8WTW3 980 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 SDCBP2Q9H190 292 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 RAB21Q9UL25 225 aa20.19■□□□□ 0.82
TRIM47-201ENST00000254816 THAP12O43422 761 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 ACLYP53396 1101 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 MEI1Q5TIA1 1274 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 RSPH3Q86UC2 560 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 LRRC57Q8N9N7 239 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 CPA5Q8WXQ8 436 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 C18orf25Q96B23 403 aaPredicted RBP20.18■□□□□ 0.82
TRIM47-201ENST00000254816 OSBPL9Q96SU4 736 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 TRMT13Q9NUP7 481 aaKnown RBP20.18■□□□□ 0.82
TRIM47-201ENST00000254816 TUBGCP4Q9UGJ1 667 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 GNRH1P01148 92 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 THPOP40225 353 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 ZNF132P52740 706 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 GPC5P78333 572 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 NFX1Q12986 1120 aaKnown RBP20.18■□□□□ 0.82
TRIM47-201ENST00000254816 ITGA7Q13683 1181 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 IFI16Q16666 785 aaKnown RBP20.18■□□□□ 0.82
TRIM47-201ENST00000254816 TWF2Q6IBS0 349 aaKnown RBP20.18■□□□□ 0.82
TRIM47-201ENST00000254816 ACAD10Q6JQN1 1059 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 SESTD1Q86VW0 696 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 CYFIP2Q96F07 1278 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 SMYD3Q9H7B4 428 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 PARP2Q9UGN5 583 aa20.18■□□□□ 0.82
TRIM47-201ENST00000254816 RPS6KA5O75582 802 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 UNGP13051 313 aaPredicted RBP20.17■□□□□ 0.82
TRIM47-201ENST00000254816 ZNF677Q86XU0 584 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 CD302Q8IX05 232 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 SMG8Q8ND04 991 aaKnown RBP20.17■□□□□ 0.82
TRIM47-201ENST00000254816 TAF4BQ92750 862 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 HPDLQ96IR7 371 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 SENP6Q9GZR1 1112 aaPredicted RBP20.17■□□□□ 0.82
TRIM47-201ENST00000254816 PLEKHA5Q9HAU0 1116 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 ABCB6Q9NP58 842 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 ITGA11Q9UKX5 1188 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 ST3GAL5Q9UNP4 418 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 HYOU1Q9Y4L1 999 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 IPPQ9Y573 584 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 PTCH2Q9Y6C5 1203 aa20.17■□□□□ 0.82
TRIM47-201ENST00000254816 PPEF2O14830 753 aa20.16■□□□□ 0.82
TRIM47-201ENST00000254816 MGAT3Q09327 533 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms