RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 NOA1Q8NC60 698 aaKnown RBP18.46■□□□□ 0.55
PCCB-201ENST00000251654 ZMAT2Q96NC0 199 aaKnown RBP18.46■□□□□ 0.55
PCCB-201ENST00000251654 ABCB6Q9NP58 842 aa18.46■□□□□ 0.55
PCCB-201ENST00000251654 NXF1Q9UBU9 619 aaKnown RBP18.46■□□□□ 0.55
PCCB-201ENST00000251654 STXBP5LQ9Y2K9 1186 aa18.46■□□□□ 0.55
PCCB-201ENST00000251654 SCN1AP35498 2009 aa18.46■□□□□ 0.55
PCCB-201ENST00000251654 RECQL4O94761 1208 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 CYP1A2P05177 515 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 ATICP31939 592 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 CENPCQ03188 943 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 ZBTB6Q15916 424 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 FAM47CQ5HY64 1035 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 ALKAL1Q6UXT8 129 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 NT5DC3Q86UY8 548 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 PXYLP1Q8TE99 480 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 KIF12Q96FN5 646 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 TRIM6Q9C030 488 aaPredicted RBP18.45■□□□□ 0.54
PCCB-201ENST00000251654 EPC1Q9H2F5 836 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 DPP3Q9NY33 737 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 DDX20Q9UHI6 824 aaKnown RBP18.45■□□□□ 0.54
PCCB-201ENST00000251654 DERAQ9Y315 318 aa18.45■□□□□ 0.54
PCCB-201ENST00000251654 FRMPD3Q5JV73 1810 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 KIF4AO95239 1232 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 GNRH1P01148 92 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 NOMO3P69849 1222 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 TRIM72Q6ZMU5 477 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 RPAINQ86UA6 219 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 ZNF606Q8WXB4 792 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 CYFIP2Q96F07 1278 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 RPGRIP1Q96KN7 1286 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 ZSWIM1Q9BR11 485 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 SDCBP2Q9H190 292 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 CNTN3Q9P232 1028 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 CTTNBP2NLQ9P2B4 639 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 CHORDC1Q9UHD1 332 aaPredicted RBP18.44■□□□□ 0.54
PCCB-201ENST00000251654 NOC2LQ9Y3T9 749 aaKnown RBP18.44■□□□□ 0.54
PCCB-201ENST00000251654 CDY2AQ9Y6F7 541 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 THAP12O43422 761 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 STAU1O95793 577 aaKnown RBP18.44■□□□□ 0.54
PCCB-201ENST00000251654 MYCNP04198 464 aaPredicted RBP18.44■□□□□ 0.54
PCCB-201ENST00000251654 RAP1GAPP47736 663 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 DNA2P51530 1060 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 RBM10P98175 930 aaKnown RBP18.44■□□□□ 0.54
PCCB-201ENST00000251654 RPS6KA1Q15418 735 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 PTPROQ16827 1216 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 NAA35Q5VZE5 725 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 PEX26Q7Z412 305 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 GPR161Q8N6U8 529 aaKnown RBP18.44■□□□□ 0.54
PCCB-201ENST00000251654 PCSK9Q8NBP7 692 aaKnown RBP18.44■□□□□ 0.54
PCCB-201ENST00000251654 CAGE1Q8TC20 777 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 RAET1EQ8TD07 263 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 CPA5Q8WXQ8 436 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 ZNF653Q96CK0 615 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 HES6Q96HZ4 224 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 HPDLQ96IR7 371 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 CALR3Q96L12 384 aaKnown RBP18.44■□□□□ 0.54
PCCB-201ENST00000251654 SENP6Q9GZR1 1112 aaPredicted RBP18.44■□□□□ 0.54
PCCB-201ENST00000251654 AGAP1Q9UPQ3 857 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 TRPV2Q9Y5S1 764 aa18.44■□□□□ 0.54
PCCB-201ENST00000251654 CHRNA1P02708 482 aa18.43■□□□□ 0.54
PCCB-201ENST00000251654 YARSP54577 528 aaKnown RBP18.43■□□□□ 0.54
PCCB-201ENST00000251654 TUBB4BP68371 445 aa18.43■□□□□ 0.54
PCCB-201ENST00000251654 HTRA3P83110 453 aa18.43■□□□□ 0.54
PCCB-201ENST00000251654 ZNF394Q53GI3 561 aa18.43■□□□□ 0.54
PCCB-201ENST00000251654 MON1BQ7L1V2 547 aa18.43■□□□□ 0.54
PCCB-201ENST00000251654 RSPH3Q86UC2 560 aa18.43■□□□□ 0.54
PCCB-201ENST00000251654 PASD1Q8IV76 773 aa18.43■□□□□ 0.54
PCCB-201ENST00000251654 MCOLN2Q8IZK6 566 aa18.43■□□□□ 0.54
PCCB-201ENST00000251654 SMYD3Q9H7B4 428 aa18.43■□□□□ 0.54
PCCB-201ENST00000251654 EHD2Q9NZN4 543 aa18.43■□□□□ 0.54
PCCB-201ENST00000251654 M0QZ92 97 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 CES2O00748 559 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 H2AFXP16104 143 aaPredicted RBP18.42■□□□□ 0.54
PCCB-201ENST00000251654 AKAP5P24588 427 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 CDH8P55286 799 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 YWHAEP62258 255 aaKnown RBP18.42■□□□□ 0.54
PCCB-201ENST00000251654 RBP5P82980 135 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 ITIH3Q06033 890 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 C11orf63Q6NUN7 778 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 FBXO38Q6PIJ6 1188 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 SMARCAL1Q9NZC9 954 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 TUBGCP4Q9UGJ1 667 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 CTSHP09668 335 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 BRD2P25440 801 aaKnown RBP18.42■□□□□ 0.54
PCCB-201ENST00000251654 SSTR3P32745 418 aaPredicted RBP18.42■□□□□ 0.54
PCCB-201ENST00000251654 NSFP46459 744 aaKnown RBP18.42■□□□□ 0.54
PCCB-201ENST00000251654 MGAT3Q09327 533 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 XKR4Q5GH76 650 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 GLRA4Q5JXX5 417 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 SMG8Q8ND04 991 aaKnown RBP18.42■□□□□ 0.54
PCCB-201ENST00000251654 ZNF564Q8TBZ8 553 aaPredicted RBP18.42■□□□□ 0.54
PCCB-201ENST00000251654 TFAP2BQ92481 460 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 MS4A14Q96JA4 679 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 NUP85Q9BW27 656 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 PDCL3Q9H2J4 239 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 RNF39Q9H2S5 420 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 ANKZF1Q9H8Y5 726 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 AVENQ9NQS1 362 aaPredicted RBP18.42■□□□□ 0.54
PCCB-201ENST00000251654 UVRAGQ9P2Y5 699 aa18.42■□□□□ 0.54
PCCB-201ENST00000251654 RNF14Q9UBS8 474 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms