RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Mdm4O35618 489 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Krt10P02535 570 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Usp10P52479 792 aaKnown RBP14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Trim43cP86449 446 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Mettl17Q3U2U7 461 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Rnpc3Q3UZ01 514 aaKnown RBP14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Atl2Q6PA06 583 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Tcp10aQ80W76 438 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Llgl1Q80Y17 1036 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Tbc1d22aQ8R5A6 516 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 ToporslQ9D2F8 683 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Mxra8Q9DBV4 442 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Nudt5Q9JKX6 218 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Cul3Q9JLV5 768 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Tlr2Q9QUN7 784 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Scgb2b11A0A087WR49 112 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Mms22lB1AUR6 1238 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 PkmP52480 531 aaKnown RBP14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Rnf180Q3U827 592 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Wdr41Q3UDP0 460 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Zfp956Q3UZY6 572 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Ino80dQ66JY2 873 aaKnown RBP14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Dqx1Q924H9 718 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 CalcbQ99MP3 130 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Angptl2Q9R045 493 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Lypla2Q9WTL7 231 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Zscan4-ps3A0A1B0GRH6 506 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Zscan4-ps2A0A1C7CYU6 506 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Clcn3P51791 818 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Nol4P60954 483 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Meis2P97367 477 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 InscQ3HNM7 579 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Brip1Q5SXJ3 1174 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Btnl9Q8BJE2 536 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Slf1Q8R3P9 1054 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Nol6Q8R5K4 1152 aaKnown RBP14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Scn4aQ9ER60 1841 aa14.55□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Apba3O88888 571 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Scp2P32020 547 aaKnown RBP14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 VdrP48281 422 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 PklrP53657 574 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Msx3P70354 204 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Q3TQQ9 903 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Mrgprb8Q7TN51 330 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Smyd3Q9CWR2 428 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Ddx47Q9CWX9 455 aaKnown RBP14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Sh2b2Q9JID9 621 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 FscbA1EGX6 1074 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Barx2O08686 283 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Exoc7O35250 697 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 DtnbO70585 659 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Anxa5P48036 319 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Stx1bP61264 288 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Twf1Q91YR1 350 aaKnown RBP14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Gimap3Q99MI6 301 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Snx29Q9D3S3 818 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 C1qtnf1Q9QXP7 281 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Gm10250G3X9L6 160 aaKnown RBP14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 EsrraO08580 422 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Cdc25cP48967 447 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Rab3ipQ68EF0 428 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Atg9bQ6EBV9 922 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Ric8bQ80XE1 520 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 NemfQ8CCP0 1064 aaKnown RBP14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Pop1Q8K205 1045 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Vmn1r213Q8R278 384 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Nudt12Q9DCN1 462 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Atp5hQ9DCX2 161 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Klhl41A2AUC9 606 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Mmp10O55123 476 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Hoxc6P10629 235 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Lta4hP24527 611 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 OsbpQ3B7Z2 805 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Ifnl2Q4VK74 193 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Hsph1Q61699 858 aaKnown RBP14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Olfml3Q8BK62 406 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Pi4kbQ8BKC8 816 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Olfr805Q8VFI4 319 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Rhobtb2Q91V93 728 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Noxred1Q9D3S5 366 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Fut8Q9WTS2 575 aa14.54□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Pdha1P35486 390 aaKnown RBP14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Rad54lP70270 747 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Atp9bP98195 1146 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 PapolaQ61183 739 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Jade1Q6ZPI0 834 aaKnown RBP14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Q8BGN9 141 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Ccdc159Q8C963 411 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Afg3l1Q920A7 789 aaKnown RBP14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 CacybpQ9CXW3 229 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Rtn3Q9ES97 964 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Zscan12Q9Z1D7 501 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Brwd3A2AHJ4 1799 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Tcp10bE9PYJ0 438 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 MycP01108 439 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 EpoP07321 192 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 AlbP07724 608 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Casp2P29594 452 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 Ndufs6P52503 116 aa14.53□□□□□ -0.08
Pcdha1-202ENSMUST00000193839 LbpQ61805 481 aa14.53□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms