RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Iqcb1Q8BP00 598 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Agap1Q8BXK8 857 aaKnown RBP13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Tmx4Q8C0L0 335 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Gtpbp10Q8K013 366 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Chst12Q99LL3 419 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Sertad2Q9JJG5 309 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Atp1a4Q9WV27 1032 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Cntnap5aQ0V8T9 1304 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Akap17bA2A3V1 959 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Cyp2b23E9Q593 491 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Zfp408H7BX78 710 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Lrrc6O88978 473 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Pde6bP23440 856 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Gucy2gQ6TL19 1100 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Lrrc66Q8K0B3 872 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Tom1l1Q923U0 474 aa13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Oxct1Q9D0K2 520 aaKnown RBP13.08□□□□□ -0.32
Ddx55-202ENSMUST00000111438 1700001O22RikA2APZ1 375 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Ccdc121E9Q6D3 323 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Gm6583E9Q8Z1 469 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 PurbO35295 324 aaKnown RBP13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Actn4P57780 912 aaKnown RBP13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Rnpc3Q3UZ01 514 aaKnown RBP13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Krt15Q61414 452 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Mrps31Q61733 384 aaKnown RBP13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Snx19Q6P4T1 997 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Mpp4Q6P7F1 635 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Znf12Q7TSI0 686 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 WhrnQ80VW5 918 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Tmco3Q8BH01 678 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Gtf3c6Q9D8P7 227 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Cnbd1B1AWM0 430 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Acp4D3YTS9 425 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Cntnap3E9PY62 1287 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Adam19O35674 920 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Ass1P16460 412 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Ptcd3Q14C51 685 aaKnown RBP13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Muc3aQ3U5A2 218 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Usp17laQ61068 526 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Cd300lfQ6SJQ7 337 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Neu4Q8BZL1 478 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Ca12Q8CI85 354 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Olfr532Q8VGT4 309 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Asic2Q925H0 512 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 GhdcQ99J23 532 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Sdcbp2Q99JZ0 292 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Trim10Q9WUH5 489 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Eif2ak3Q9Z2B5 1114 aa13.07□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Col4a6B1AVK5 1691 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Scgb2b11A0A087WR49 112 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Gm42641I6L9G2 585 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 ArvcfP98203 962 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Rplp2P99027 115 aaKnown RBP13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 FancbQ5XJY6 703 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Ncoa7Q6DFV7 943 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Arl5cQ6P068 179 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Ccdc57Q6PHN1 1016 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Gtf2a2Q80ZM7 109 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 AtripQ8BMG1 785 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Etv3Q8R4Z4 513 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Clp1Q99LI9 425 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 NagaQ9QWR8 415 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Gfpt2Q9Z2Z9 682 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Dpy19l4A2AJQ3 722 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Grik3B1AS29 919 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Gm28042B7ZCM9 1014 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Gnl1P36916 607 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Col6a1Q04857 1025 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Sh3bp2Q06649 559 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Upf3bQ3ULL6 472 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Lrig2Q52KR2 1054 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Zfp658Q5PPQ4 887 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Bag1Q60739 355 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Mxd4Q60948 209 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Fmnl3Q6ZPF4 1028 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Ppm1eQ80TL0 749 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Spata20Q80YT5 790 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 NrcamQ810U4 1256 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Elmo3Q8BYZ7 720 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Creb3l3Q91XE9 479 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Fam187aQ9D3R5 417 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Rnf14Q9JI90 485 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Pdk2Q9JK42 407 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Sfmbt1Q9JMD1 863 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Slc26a3Q9WVC8 757 aa13.06□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Mroh4G3X8W1 983 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Bcl7cO08664 217 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Hoxd11P23813 323 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Ephb4P54761 987 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Frmd5Q6P5H6 517 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Kcnt1Q6ZPR4 1224 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 PolrmtQ8BKF1 1207 aaKnown RBP13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Cbx8Q9QXV1 362 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Kcnd2Q9Z0V2 630 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Nr1h3Q9Z0Y9 445 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Plin4O88492 1403 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Abcb5B5X0E4 1255 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 ZfxP17012 799 aa13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Nap1l1P28656 391 aaKnown RBP13.05□□□□□ -0.32
Ddx55-202ENSMUST00000111438 Ppp2r2cQ8BG02 447 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms