RNA–Protein interactions for RNA: ENSMUST00000063838.10

Fam49b-201, Transcript of Protein FAM49B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Fam49b, Length 3,797 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fam49b-201ENSMUST00000063838 SynrgQ5SV85 1306 aa13.76□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Nub1P54729 614 aa13.76□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Drd5Q8BLD9 478 aa13.76□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Fam204aQ8C6C7 236 aa13.76□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Slc12a6Q924N4 1150 aa13.76□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Zfp64Q99KE8 643 aa13.76□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Tgm5Q9D7I9 724 aa13.76□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Slc22a3Q9WTW5 551 aa13.76□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Tnnc2P20801 160 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 GmpsQ3THK7 693 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Slc10a5Q5PT54 434 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Olfr670Q7TRP3 312 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Agap1Q8BXK8 857 aaKnown RBP13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Rfx6Q8C7R7 927 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 1700129C05RikQ9CQ77 218 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Tssk3Q9D2E1 268 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Col5a2Q3U962 1497 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Kndc1Q0KK55 1742 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Cops5O35864 334 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Bace1P56818 501 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Stx2Q00262 289 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Cul4aQ3TCH7 759 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Trcg1Q58Y74 825 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Nlrp4fQ66X05 959 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Ccdc40Q8BI79 1192 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Mill1Q8HWE7 395 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Rpa1Q8VEE4 623 aaKnown RBP13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Zfyve19Q9DAZ9 389 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Heg1E9Q7X6 1337 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Bpifb9bA2AJD1 591 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Clcn3P51791 818 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Ugt3a1Q3UP75 523 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 CcnjlQ5SRT8 387 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Pabpn1lQ5XFR0 273 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Bpifb9aQ80XI7 591 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Mical2Q8BML1 960 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Agap3Q8VHH5 910 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Cdk5rap3Q99LM2 503 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Limd1Q9QXD8 668 aa13.75□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Zfp839E9PUU5 921 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Capn6O35646 641 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Rnaseh1O70338 285 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Stmn2P55821 179 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Rbm20Q3UQS8 1199 aaKnown RBP13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Acot5Q6Q2Z6 421 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 D630039A03RikQ8K0M7 236 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 HibchQ8QZS1 385 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Caskin2Q8VHK1 1201 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Slfn14V9GXG1 899 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Lonrf1D3YY23 762 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Wdr95D3Z7A8 784 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Ets2P15037 468 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Rab6bP61294 208 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Gspt2Q149F3 632 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Smcr8Q3UMB5 935 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Serpinb6Q60854 378 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Rab34Q64008 259 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Taf5Q8C092 801 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Clip4Q8CI96 704 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Arhgap18Q8K0Q5 663 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Castor1Q9CWQ8 331 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 IkbipQ9DBZ1 373 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Tlr9Q9EQU3 1032 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Gbp2Q9Z0E6 589 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Col18a1P39061 1774 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 CalrP14211 416 aaKnown RBP13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Gjb1P28230 283 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Foxn1Q61575 648 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Gpr150Q8BL07 427 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Dus1lQ8C2P3 475 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Anapc4Q91W96 807 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 ErmapQ9JLN5 566 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Smok2bQ9QYZ3 484 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Smok2aQ9QYZ6 504 aa13.74□□□□□ -0.21
Fam49b-201ENSMUST00000063838 6030498E09RikB1AX85 169 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Gm3371F7CQW8 167 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Casq2O09161 415 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Myl1P05977 188 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Serpina1aP07758 413 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Ca8P28651 291 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Phactr4Q501J7 694 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Slc9c1Q6UJY2 1175 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Nsun6Q7TS68 476 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Gpr151Q7TSN6 422 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Robo4Q8C310 1012 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Kbtbd13Q8C828 458 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Pdik1lQ8QZR7 341 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Pacsin3Q99JB8 424 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Setd6Q9CWY3 473 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Thumpd2Q9CZB3 528 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Orc3Q9JK30 715 aaKnown RBP13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Fam171a2A2A699 822 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Atp2a2O55143 1044 aaKnown RBP13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Casp2P29594 452 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Oprl1P35377 367 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Eif3eP60229 445 aaKnown RBP13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Ppm1jQ149T7 507 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 4933427I04RikQ3V053 235 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Dzip1lQ499E4 774 aa13.73□□□□□ -0.21
Fam49b-201ENSMUST00000063838 Znf652Q5DU09 608 aa13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms