RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Msl1Q6PDM1 616 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tdpoz4Q6YCH2 370 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Atg4cQ811C2 458 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 N4bp3Q8C7U1 537 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tlr3Q99MB1 905 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Rex1bdQ9CYZ6 169 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Toe1Q9D2E2 511 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Mettl1Q9Z120 268 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Cyp2ab1S4R196 498 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Myh9Q8VDD5 1960 aaKnown RBP14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Cntnap5cQ0V8T7 1305 aa14.2□□□□□ -0.14
Nup88-201ENSMUST00000035283 Mtcl1Q3UHU5 1945 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Myl2P51667 166 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Garnl3Q3V0G7 1038 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Oog4Q4G0C7 502 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Gm13103Q4VAD2 491 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Atl2Q6PA06 583 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Dnali1Q8BVN8 258 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Olfr1499Q8VG65 314 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Hdac9Q99N13 588 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Mrps22Q9CXW2 359 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Borcs6Q9D6W8 360 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Sgf29Q9DA08 293 aaKnown RBP14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 PodxlQ9R0M4 503 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Frmpd3A0A140LIW3 1774 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 EloblA6PWE0 161 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ccdc6D3YZP9 469 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Rtn2O70622 471 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Sstr1P30873 391 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Uchl4P58321 233 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 NfiaQ02780 532 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ppm1jQ149T7 507 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Togaram2Q3TYG6 1002 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 D630036H23RikQ3UQD6 204 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Soat1Q61263 540 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Col4a5Q63ZW6 1691 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Gpd2Q64521 727 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Adamtsl1Q8BLI0 1745 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ccdc28bQ8CEG5 200 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 ClasrpQ8CFC7 668 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Pde6cQ91ZQ1 861 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tmx2Q9D710 295 aaKnown RBP14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 H2-OaQ9QWV1 250 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Abcb11Q9QY30 1321 aa14.19□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ltbp1Q8CG19 1712 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ccdc170D3YXL0 722 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Dusp8O09112 663 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tnfrsf18O35714 228 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tlk2O55047 718 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ptp4a2O70274 167 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 CnpP16330 420 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 VegfaQ00731 214 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Grm2Q14BI2 872 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Gm5168Q4KL04 211 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ppp1r13lQ5I1X5 824 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tdrd5Q5VCS6 1040 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Capn3Q64691 821 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Dupd1Q8BK84 215 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Slc39a13Q8BZH0 361 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Pnma1Q8C1C8 353 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Rtp1Q8C8C1 263 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Kdm1bQ8CIG3 826 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Lin7aQ8JZS0 233 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ivns1abpQ920Q8 642 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Pdk2Q9JK42 407 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 XkQ9QXY7 446 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Scn3aA2ASI5 1947 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 B020011L13RikA0A087WQI7 412 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Rbp3P49194 1234 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 FerP70451 823 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Epas1P97481 874 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Nt5dc3Q3UHB1 546 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Vil1Q62468 827 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Kcnk18Q6VV64 394 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 C2cd5Q7TPS5 1016 aaKnown RBP14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Gprasp2Q8BUY8 826 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 4921504E06RikQ8CET2 560 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tph2Q8CGV2 488 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Snap47Q8R570 413 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 WaslQ91YD9 501 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Ier5lQ99J55 406 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 St13Q99L47 371 aaKnown RBP14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Sfmbt1Q9JMD1 863 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Atp6v1c1Q9Z1G3 382 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Taf1Q80UV9 1891 aa14.18□□□□□ -0.14
Nup88-201ENSMUST00000035283 Arhgap42B2RQE8 841 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Birc5O70201 140 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 PdgfraP26618 1089 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 VdrP48281 422 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Gbp8Q2V6D6 525 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 NostrinQ6WKZ7 506 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Cpsf7Q8BTV2 471 aaKnown RBP14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Tmem145Q8C4U2 746 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Znf276Q8CE64 614 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Sugp1Q8CH02 643 aaKnown RBP14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Eif2b5Q8CHW4 717 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Rpn1Q91YQ5 608 aaKnown RBP14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 4930519G04RikQ9CPT7 205 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 Arl8bQ9CQW2 186 aa14.17□□□□□ -0.14
Nup88-201ENSMUST00000035283 AticQ9CWJ9 592 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 59.2 ms