RNA–Protein interactions for RNA: snR6

snR6, Transcript of U6 spliceosomal RNA (U6 snRNA), yeastyeast

Gene snR6, Length 112 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR6snR6 RAD53P22216 821 aa0.07□□□□□ -2.4
snR6snR6 CUE2P36075 443 aaKnown RBP0.07□□□□□ -2.4
snR6snR6 ALG14P38242 237 aa0.07□□□□□ -2.4
snR6snR6 VHR2P40041 505 aa0.07□□□□□ -2.4
snR6snR6 AGE1Q04412 482 aa0.07□□□□□ -2.4
snR6snR6 CDA2Q06703 312 aa0.07□□□□□ -2.4
snR6snR6 RPP1AP05318 106 aaPredicted RBP0.06□□□□□ -2.4
snR6snR6 YUR1P26725 428 aa0.06□□□□□ -2.4
snR6snR6 TMT1P32643 299 aa0.06□□□□□ -2.4
snR6snR6 THI80P35202 319 aa0.06□□□□□ -2.4
snR6snR6 PGM2P37012 569 aaKnown RBP0.06□□□□□ -2.4
snR6snR6 RRM3P38766 723 aa0.06□□□□□ -2.4
snR6snR6 MET30P39014 640 aa0.06□□□□□ -2.4
snR6snR6 STB2P46679 850 aa0.06□□□□□ -2.4
snR6snR6 HOF1Q05080 669 aa0.06□□□□□ -2.4
snR6snR6 ALR1Q08269 859 aa0.06□□□□□ -2.4
snR6snR6 BDS1Q08347 646 aa0.06□□□□□ -2.4
snR6snR6 RAD59Q12223 238 aa0.06□□□□□ -2.4
snR6snR6 PDC1P06169 563 aaKnown RBP0.05□□□□□ -2.4
snR6snR6 YHL008CP38750 627 aa0.05□□□□□ -2.4
snR6snR6 AKR1P39010 764 aa0.05□□□□□ -2.4
snR6snR6 YNR065CP53751 1116 aa0.05□□□□□ -2.4
snR6snR6 SDH1Q00711 640 aa0.05□□□□□ -2.4
snR6snR6 ERF2Q06551 359 aa0.05□□□□□ -2.4
snR6snR6 NSI1Q12457 570 aa0.05□□□□□ -2.4
snR6snR6 RDS2P19541 446 aaKnown RBP0.04□□□□□ -2.4
snR6snR6 MSB1P21339 1137 aaKnown RBP0.04□□□□□ -2.4
snR6snR6 AHP1P38013 176 aaKnown RBP0.04□□□□□ -2.4
snR6snR6 DLD3P39976 496 aaKnown RBP0.04□□□□□ -2.4
snR6snR6 GLO1P50107 326 aa0.04□□□□□ -2.4
snR6snR6 MNN10P50108 393 aaKnown RBP0.04□□□□□ -2.4
snR6snR6 TBF1Q02457 562 aa0.04□□□□□ -2.4
snR6snR6 GAS5Q08193 484 aa0.04□□□□□ -2.4
snR6snR6 PUS9Q12069 462 aa0.04□□□□□ -2.4
snR6snR6 RPP2BP02400 110 aaKnown RBP0.03□□□□□ -2.4
snR6snR6 NGR1P32831 672 aaKnown RBP0.03□□□□□ -2.4
snR6snR6 MKS1P34072 584 aa0.03□□□□□ -2.4
snR6snR6 TSA1P34760 196 aaKnown RBP0.03□□□□□ -2.4
snR6snR6 SHM2P37291 469 aaKnown RBP0.03□□□□□ -2.4
snR6snR6 UBP14P38237 781 aaKnown RBP0.03□□□□□ -2.4
snR6snR6 YER158CP40095 573 aa0.03□□□□□ -2.4
snR6snR6 MSE1P48525 536 aa0.03□□□□□ -2.4
snR6snR6 RTF1P53064 558 aa0.03□□□□□ -2.4
snR6snR6 YPR109WQ06104 294 aa0.03□□□□□ -2.4
snR6snR6 PUF3Q07807 879 aaKnown RBP RIP-Chip data0.03□□□□□ -2.4not detected
snR6snR6 TRM2P33753 639 aa0.02□□□□□ -2.41
snR6snR6 RIM8P53179 542 aa0.02□□□□□ -2.41
snR6snR6 GIS2P53849 153 aaKnown RBP RIP-Chip data0.02□□□□□ -2.41not detected
snR6snR6 APP1P53933 587 aa0.02□□□□□ -2.41
snR6snR6 CTF4Q01454 927 aa0.02□□□□□ -2.41
snR6snR6 DFG5Q05031 458 aa0.02□□□□□ -2.41
snR6snR6 CTS1P29029 562 aa0.01□□□□□ -2.41
snR6snR6 AIM3P38266 947 aaKnown RBP0.01□□□□□ -2.41
snR6snR6 MVP1P40959 511 aaKnown RBP0.01□□□□□ -2.41
snR6snR6 MRPS35P53292 345 aa0.01□□□□□ -2.41
snR6snR6 TY1A-DR2Q03964 440 aaKnown RBP0.01□□□□□ -2.41
snR6snR6 TOD6P34219 525 aa0□□□□□ -2.41
snR6snR6 MRPL16P38064 232 aa0□□□□□ -2.41
snR6snR6 SEA4P38164 1038 aa0□□□□□ -2.41
snR6snR6 SSP1P38871 571 aa0□□□□□ -2.41
snR6snR6 UBA2P52488 636 aa0□□□□□ -2.41
snR6snR6 MSN5P52918 1224 aa0□□□□□ -2.41
snR6snR6 CLU1Q03690 1277 aaKnown RBP0□□□□□ -2.41
snR6snR6 STB3Q12427 513 aa0□□□□□ -2.41
snR6snR6 PDI1P17967 522 aaKnown RBP-0.01□□□□□ -2.41
snR6snR6 NAM7P30771 971 aaKnown RBP-0.01□□□□□ -2.41
snR6snR6 HSP78P33416 811 aa-0.01□□□□□ -2.41
snR6snR6 ZAP1P47043 880 aa-0.01□□□□□ -2.41
snR6snR6 RPA14P50106 137 aa-0.01□□□□□ -2.41
snR6snR6 YPR097WQ06839 1073 aa-0.01□□□□□ -2.41
snR6snR6 STE4P18851 423 aa-0.02□□□□□ -2.41
snR6snR6 LSB5P25369 354 aa-0.02□□□□□ -2.41
snR6snR6 RAM2P29703 316 aa-0.02□□□□□ -2.41
snR6snR6 ORC6P38826 435 aa-0.02□□□□□ -2.41
snR6snR6 GIS4Q04233 774 aa-0.02□□□□□ -2.41
snR6snR6 NDJ1Q12366 352 aa-0.02□□□□□ -2.41
snR6snR6 YDL206WQ12424 762 aa-0.02□□□□□ -2.41
snR6snR6 SOD2P00447 233 aa-0.03□□□□□ -2.41
snR6snR6 NAR1P23503 491 aaKnown RBP-0.03□□□□□ -2.41
snR6snR6 VAC17P25591 423 aa-0.03□□□□□ -2.41
snR6snR6 FBP26P32604 452 aa-0.03□□□□□ -2.41
snR6snR6 SET1P38827 1080 aaKnown RBP-0.03□□□□□ -2.41
snR6snR6 MPT5P39016 859 aaKnown RBP RIP-Chip data-0.03□□□□□ -2.41not detected
snR6snR6 AIM21P40563 679 aa-0.03□□□□□ -2.41
snR6snR6 STU2P46675 888 aa-0.03□□□□□ -2.41
snR6snR6 SLI1P53304 468 aa-0.03□□□□□ -2.41
snR6snR6 FRA1Q07825 749 aa-0.03□□□□□ -2.41
snR6snR6 STE6P12866 1290 aa-0.04□□□□□ -2.42
snR6snR6 SLA1P32790 1244 aa-0.04□□□□□ -2.42
snR6snR6 SPR3P41901 512 aa-0.04□□□□□ -2.42
snR6snR6 YMR196WQ04336 1088 aa-0.04□□□□□ -2.42
snR6snR6 PPM2Q08282 695 aa-0.04□□□□□ -2.42
snR6snR6 SLP1Q12232 587 aa-0.04□□□□□ -2.42
snR6snR6 GCD1P09032 578 aaPredicted RBP-0.05□□□□□ -2.42
snR6snR6 ERS1P17261 260 aa-0.05□□□□□ -2.42
snR6snR6 MDM10P18409 493 aa-0.05□□□□□ -2.42
snR6snR6 RGR1P19263 1082 aa-0.05□□□□□ -2.42
snR6snR6 ALA1P40825 983 aaKnown RBP-0.05□□□□□ -2.42
snR6snR6 DSE4P53753 1117 aa-0.05□□□□□ -2.42
snR6snR6 REC8Q12188 680 aa-0.05□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms