RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	ALA1	P40825	983 aa	Known RBP	7.17	□□□□□ -1.26
RSA1	YPL193W	KRE33	P53914	1056 aa	Known RBP	7.17	□□□□□ -1.26
RSA1	YPL193W	ADE12	P80210	433 aa	Known RBP	7.16	□□□□□ -1.26
RSA1	YPL193W	SYT1	Q06836	1226 aa		7.14	□□□□□ -1.27
RSA1	YPL193W	BIO2	P32451	375 aa		7.13	□□□□□ -1.27
RSA1	YPL193W	YFL066C	P43538	392 aa		7.13	□□□□□ -1.27
RSA1	YPL193W	YNL108C	P53929	270 aa		7.13	□□□□□ -1.27
RSA1	YPL193W	HDA3	Q06623	655 aa		7.12	□□□□□ -1.27
RSA1	YPL193W	SUM1	P46676	1062 aa		7.11	□□□□□ -1.27
RSA1	YPL193W	SLX8	P40072	274 aa		7.1	□□□□□ -1.27
RSA1	YPL193W	SBE2	P42223	864 aa	Known RBP	7.1	□□□□□ -1.27
RSA1	YPL193W	ENO2	P00925	437 aa	Known RBP	7.09	□□□□□ -1.27
RSA1	YPL193W	ATG3	P40344	310 aa		7.09	□□□□□ -1.27
RSA1	YPL193W	JJJ2	P46997	583 aa		7.08	□□□□□ -1.28
RSA1	YPL193W	IRE1	P32361	1115 aa		7.07	□□□□□ -1.28
RSA1	YPL193W	YPP1	P46951	817 aa		7.07	□□□□□ -1.28
RSA1	YPL193W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.07	□□□□□ -1.28	not detected
RSA1	YPL193W	YDR461C-A	Q2V2P7	80 aa		7.07	□□□□□ -1.28
RSA1	YPL193W	SUP45	P12385	437 aa	Known RBP	7.06	□□□□□ -1.28
RSA1	YPL193W	SHM1	P37292	490 aa	Predicted RBP	7.06	□□□□□ -1.28
RSA1	YPL193W	YPR053C	Q6Q5F3	151 aa		7.06	□□□□□ -1.28
RSA1	YPL193W	UTP13	Q05946	817 aa	Known RBP	7.05	□□□□□ -1.28
RSA1	YPL193W	TDA6	Q06466	467 aa		7.05	□□□□□ -1.28
RSA1	YPL193W	CCT8	P47079	568 aa	Known RBP	7.04	□□□□□ -1.28
RSA1	YPL193W	YNR014W	P53719	212 aa		7.04	□□□□□ -1.28
RSA1	YPL193W	FPS1	P23900	669 aa		7.03	□□□□□ -1.28
RSA1	YPL193W	MRPL16	P38064	232 aa		7.03	□□□□□ -1.28
RSA1	YPL193W	YJL007C	P47080	104 aa		7.03	□□□□□ -1.28
RSA1	YPL193W	PDC6	P26263	563 aa	Known RBP	7.01	□□□□□ -1.29
RSA1	YPL193W	YMR187C	Q03236	431 aa		7.01	□□□□□ -1.29
RSA1	YPL193W	PSH1	Q12161	406 aa		7.01	□□□□□ -1.29
RSA1	YPL193W	SWI5	P08153	709 aa		7	□□□□□ -1.29
RSA1	YPL193W	STB3	Q12427	513 aa		7	□□□□□ -1.29
RSA1	YPL193W	AIM9	P40053	627 aa	Known RBP	6.99	□□□□□ -1.29
RSA1	YPL193W	RIM21	P48565	533 aa		6.99	□□□□□ -1.29
RSA1	YPL193W	GPM1	P00950	247 aa	Known RBP	6.98	□□□□□ -1.29
RSA1	YPL193W	RDS2	P19541	446 aa	Known RBP	6.98	□□□□□ -1.29
RSA1	YPL193W	SBP1	P10080	294 aa	Known RBP	6.97	□□□□□ -1.29
RSA1	YPL193W	RPS31	P05759	152 aa	Known RBP	6.96	□□□□□ -1.3
RSA1	YPL193W	BOI2	P39969	1040 aa		6.96	□□□□□ -1.3
RSA1	YPL193W	RPS6A	P0CX37	236 aa	Known RBP	6.95	□□□□□ -1.3
RSA1	YPL193W	RPS6B	P0CX38	236 aa	Predicted RBP	6.95	□□□□□ -1.3
RSA1	YPL193W	SKN7	P38889	622 aa		6.95	□□□□□ -1.3
RSA1	YPL193W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.95	□□□□□ -1.3	not detected
RSA1	YPL193W	YPQ2	Q06328	317 aa		6.95	□□□□□ -1.3
RSA1	YPL193W	PDI1	P17967	522 aa	Known RBP	6.93	□□□□□ -1.3
RSA1	YPL193W	NTH2	P35172	780 aa		6.93	□□□□□ -1.3
RSA1	YPL193W	SPR3	P41901	512 aa		6.93	□□□□□ -1.3
RSA1	YPL193W	YNL165W	P53891	406 aa		6.93	□□□□□ -1.3
RSA1	YPL193W	ENO1	P00924	437 aa	Known RBP	6.91	□□□□□ -1.3
RSA1	YPL193W	MCX1	P38323	520 aa	Predicted RBP	6.91	□□□□□ -1.3
RSA1	YPL193W	BIM1	P40013	344 aa		6.91	□□□□□ -1.3
RSA1	YPL193W	YCK2	P23292	546 aa	Known RBP	6.9	□□□□□ -1.3
RSA1	YPL193W	ATG32	P40458	529 aa		6.9	□□□□□ -1.3
RSA1	YPL193W	YFL034W	P43564	1073 aa		6.9	□□□□□ -1.3
RSA1	YPL193W	PDC5	P16467	563 aa	Known RBP	6.89	□□□□□ -1.31
RSA1	YPL193W	RTG2	P32608	588 aa	Known RBP	6.89	□□□□□ -1.31
RSA1	YPL193W	SLN1	P39928	1220 aa	Predicted RBP	6.89	□□□□□ -1.31
RSA1	YPL193W	YTA6	P40328	754 aa		6.89	□□□□□ -1.31
RSA1	YPL193W	TY1A-DR2	Q03964	440 aa	Known RBP	6.89	□□□□□ -1.31
RSA1	YPL193W	TIF1	P10081	395 aa	Known RBP	6.88	□□□□□ -1.31
RSA1	YPL193W	MET1	P36150	593 aa		6.88	□□□□□ -1.31
RSA1	YPL193W	ALD2	P47771	506 aa		6.88	□□□□□ -1.31
RSA1	YPL193W	MRX10	Q05648	414 aa		6.88	□□□□□ -1.31
RSA1	YPL193W	LEU1	P07264	779 aa	Known RBP	6.87	□□□□□ -1.31
RSA1	YPL193W	MLF3	P32047	452 aa		6.87	□□□□□ -1.31
RSA1	YPL193W	KNS1	P32350	737 aa	Predicted RBP	6.87	□□□□□ -1.31
RSA1	YPL193W	RPL34B	P40525	121 aa	Known RBP	6.87	□□□□□ -1.31
RSA1	YPL193W	YDR215C	Q12240	137 aa		6.87	□□□□□ -1.31
RSA1	YPL193W	Q0182	Q9ZZW1	134 aa		6.87	□□□□□ -1.31
RSA1	YPL193W	MCA1	Q08601	432 aa		6.86	□□□□□ -1.31
RSA1	YPL193W	RGP1	P16664	663 aa		6.85	□□□□□ -1.31
RSA1	YPL193W	KTR7	P40504	517 aa		6.85	□□□□□ -1.31
RSA1	YPL193W	TSC13	Q99190	310 aa		6.85	□□□□□ -1.31
RSA1	YPL193W	MCM1	P11746	286 aa		6.84	□□□□□ -1.31
RSA1	YPL193W	MSC7	P38694	644 aa		6.84	□□□□□ -1.31
RSA1	YPL193W	CYT1	P07143	309 aa		6.83	□□□□□ -1.32
RSA1	YPL193W	TAT1	P38085	619 aa		6.82	□□□□□ -1.32
RSA1	YPL193W	PRY1	P47032	299 aa		6.82	□□□□□ -1.32
RSA1	YPL193W	AMN1	P38285	549 aa	Predicted RBP	6.81	□□□□□ -1.32
RSA1	YPL193W	MTO1	P53070	669 aa		6.81	□□□□□ -1.32
RSA1	YPL193W	LSB6	P42951	607 aa		6.8	□□□□□ -1.32
RSA1	YPL193W	RPP1A	P05318	106 aa	Predicted RBP	6.79	□□□□□ -1.32
RSA1	YPL193W	PEP12	P32854	288 aa		6.78	□□□□□ -1.32
RSA1	YPL193W	ACS2	P52910	683 aa	Known RBP	6.78	□□□□□ -1.32
RSA1	YPL193W	HGH1	P48362	394 aa	Known RBP	6.77	□□□□□ -1.33
RSA1	YPL193W	PGM2	P37012	569 aa	Known RBP	6.75	□□□□□ -1.33
RSA1	YPL193W	PHO87	P25360	923 aa		6.74	□□□□□ -1.33
RSA1	YPL193W	ALG14	P38242	237 aa		6.74	□□□□□ -1.33
RSA1	YPL193W	GLT1	Q12680	2145 aa	Known RBP	6.74	□□□□□ -1.33
RSA1	YPL193W	PRK1	P40494	810 aa		6.73	□□□□□ -1.33
RSA1	YPL193W	HEH2	Q03281	663 aa		6.73	□□□□□ -1.33
RSA1	YPL193W	NHA1	Q99271	985 aa		6.73	□□□□□ -1.33
RSA1	YPL193W	HAP4	P14064	554 aa		6.71	□□□□□ -1.34
RSA1	YPL193W	NCL1	P38205	684 aa	Known RBP	6.71	□□□□□ -1.34
RSA1	YPL193W	TPS3	P38426	1054 aa	Known RBP	6.71	□□□□□ -1.34
RSA1	YPL193W	CUS1	Q02554	436 aa	Predicted RBP	6.71	□□□□□ -1.34
RSA1	YPL193W	YPL034W	Q03083	165 aa		6.7	□□□□□ -1.34
RSA1	YPL193W	KAP122	P32767	1081 aa		6.69	□□□□□ -1.34
RSA1	YPL193W	MAC1	P35192	417 aa		6.69	□□□□□ -1.34

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms