RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	MSN5	P52918	1224 aa		6.06	□□□□□ -1.44
TSR4	YOL022C	TY1A-DR3	Q12441	440 aa		6.06	□□□□□ -1.44
TSR4	YOL022C	CCP1	P00431	361 aa		6.05	□□□□□ -1.44
TSR4	YOL022C	SWI5	P08153	709 aa		6.05	□□□□□ -1.44
TSR4	YOL022C	UTP7	P40055	554 aa	Known RBP	6.05	□□□□□ -1.44
TSR4	YOL022C	ROG3	P43602	733 aa		6.05	□□□□□ -1.44
TSR4	YOL022C	YPQ2	Q06328	317 aa		6.05	□□□□□ -1.44
TSR4	YOL022C	NAM8	Q00539	523 aa	Known RBP	6.04	□□□□□ -1.44
TSR4	YOL022C	TY1A-MR1	Q04215	440 aa		6.04	□□□□□ -1.44
TSR4	YOL022C	TSC13	Q99190	310 aa		6.03	□□□□□ -1.44
TSR4	YOL022C	RPS6A	P0CX37	236 aa	Known RBP	6.02	□□□□□ -1.45
TSR4	YOL022C	RPS6B	P0CX38	236 aa	Predicted RBP	6.02	□□□□□ -1.45
TSR4	YOL022C	PDI1	P17967	522 aa	Known RBP	6.02	□□□□□ -1.45
TSR4	YOL022C	PHO87	P25360	923 aa		6.02	□□□□□ -1.45
TSR4	YOL022C	KTR7	P40504	517 aa		6.02	□□□□□ -1.45
TSR4	YOL022C	YFL034W	P43564	1073 aa		6.02	□□□□□ -1.45
TSR4	YOL022C	ACS2	P52910	683 aa	Known RBP	6.02	□□□□□ -1.45
TSR4	YOL022C	NTH2	P35172	780 aa		6.01	□□□□□ -1.45
TSR4	YOL022C	SHM1	P37292	490 aa	Predicted RBP	6.01	□□□□□ -1.45
TSR4	YOL022C	TGL4	P36165	910 aa		6	□□□□□ -1.45
TSR4	YOL022C	JJJ2	P46997	583 aa		6	□□□□□ -1.45
TSR4	YOL022C	GAL2	P13181	574 aa		5.99	□□□□□ -1.45
TSR4	YOL022C	UBP15	P50101	1230 aa		5.99	□□□□□ -1.45
TSR4	YOL022C	MCM1	P11746	286 aa		5.98	□□□□□ -1.45
TSR4	YOL022C	CPS1	P27614	576 aa		5.98	□□□□□ -1.45
TSR4	YOL022C	GAS4	Q08271	471 aa		5.98	□□□□□ -1.45
TSR4	YOL022C	RPS31	P05759	152 aa	Known RBP	5.97	□□□□□ -1.45
TSR4	YOL022C	CYT1	P07143	309 aa		5.97	□□□□□ -1.45
TSR4	YOL022C	HAP4	P14064	554 aa		5.97	□□□□□ -1.45
TSR4	YOL022C	UBP1	P25037	809 aa		5.97	□□□□□ -1.45
TSR4	YOL022C	AHP1	P38013	176 aa	Known RBP	5.97	□□□□□ -1.45
TSR4	YOL022C	ROM1	P53046	1155 aa		5.97	□□□□□ -1.45
TSR4	YOL022C	PUP1	P25043	261 aa		5.96	□□□□□ -1.46
TSR4	YOL022C	IRE1	P32361	1115 aa		5.96	□□□□□ -1.46
TSR4	YOL022C	HPF1	Q05164	967 aa		5.96	□□□□□ -1.46
TSR4	YOL022C	ALA1	P40825	983 aa	Known RBP	5.95	□□□□□ -1.46
TSR4	YOL022C	CUZ1	P53899	274 aa		5.95	□□□□□ -1.46
TSR4	YOL022C	RGA2	Q06407	1009 aa		5.95	□□□□□ -1.46
TSR4	YOL022C	PDC6	P26263	563 aa	Known RBP	5.94	□□□□□ -1.46
TSR4	YOL022C	YGR035C	P53222	116 aa		5.94	□□□□□ -1.46
TSR4	YOL022C	YNL165W	P53891	406 aa		5.94	□□□□□ -1.46
TSR4	YOL022C	PSH1	Q12161	406 aa		5.94	□□□□□ -1.46
TSR4	YOL022C	ECM23	Q02710	187 aa		5.93	□□□□□ -1.46
TSR4	YOL022C	RLF2	Q12495	606 aa		5.93	□□□□□ -1.46
TSR4	YOL022C	LEU1	P07264	779 aa	Known RBP	5.91	□□□□□ -1.46
TSR4	YOL022C	NGR1	P32831	672 aa	Known RBP	5.91	□□□□□ -1.46
TSR4	YOL022C	JJJ3	P47138	172 aa		5.91	□□□□□ -1.46
TSR4	YOL022C	ALD2	P47771	506 aa		5.91	□□□□□ -1.46
TSR4	YOL022C	NOB1	Q08444	459 aa	Known RBP	5.91	□□□□□ -1.46
TSR4	YOL022C	DIT1	P21623	536 aa		5.9	□□□□□ -1.46
TSR4	YOL022C	SUV3	P32580	737 aa		5.9	□□□□□ -1.46
TSR4	YOL022C	HXT5	P38695	592 aa		5.9	□□□□□ -1.46
TSR4	YOL022C	LYS5	P50113	272 aa		5.9	□□□□□ -1.46
TSR4	YOL022C	YML083C	Q04526	418 aa		5.9	□□□□□ -1.46
TSR4	YOL022C	SSA4	P22202	642 aa	Known RBP	5.89	□□□□□ -1.47
TSR4	YOL022C	MLF3	P32047	452 aa		5.89	□□□□□ -1.47
TSR4	YOL022C	YMR265C	Q03508	461 aa	Known RBP	5.89	□□□□□ -1.47
TSR4	YOL022C	DPH6	Q12429	685 aa		5.89	□□□□□ -1.47
TSR4	YOL022C	TRK2	P28584	889 aa		5.88	□□□□□ -1.47
TSR4	YOL022C	UBX7	P38349	436 aa		5.88	□□□□□ -1.47
TSR4	YOL022C	SYT1	Q06836	1226 aa		5.88	□□□□□ -1.47
TSR4	YOL022C	YDR461C-A	Q2V2P7	80 aa		5.88	□□□□□ -1.47
TSR4	YOL022C	VAN1	P23642	535 aa		5.87	□□□□□ -1.47
TSR4	YOL022C	CEM1	P39525	442 aa		5.87	□□□□□ -1.47
TSR4	YOL022C	UTP4	Q06679	776 aa	Known RBP	5.86	□□□□□ -1.47
TSR4	YOL022C	SUB2	Q07478	446 aa	Known RBP	5.86	□□□□□ -1.47
TSR4	YOL022C	Q0182	Q9ZZW1	134 aa		5.86	□□□□□ -1.47
TSR4	YOL022C	SCD5	P34758	872 aa		5.85	□□□□□ -1.47
TSR4	YOL022C	MRPL16	P38064	232 aa		5.85	□□□□□ -1.47
TSR4	YOL022C	KRE33	P53914	1056 aa	Known RBP	5.85	□□□□□ -1.47
TSR4	YOL022C	CAB1	Q04430	367 aa		5.85	□□□□□ -1.47
TSR4	YOL022C	STB3	Q12427	513 aa		5.85	□□□□□ -1.47
TSR4	YOL022C	TRS33	Q99394	268 aa		5.85	□□□□□ -1.47
TSR4	YOL022C	YTA6	P40328	754 aa		5.84	□□□□□ -1.47
TSR4	YOL022C	SPR3	P41901	512 aa		5.84	□□□□□ -1.47
TSR4	YOL022C	RGP1	P16664	663 aa		5.83	□□□□□ -1.48
TSR4	YOL022C	ADE12	P80210	433 aa	Known RBP	5.83	□□□□□ -1.48
TSR4	YOL022C	CWC15	Q03772	175 aa	Known RBP	5.82	□□□□□ -1.48
TSR4	YOL022C	PUF6	Q04373	656 aa	Known RBP	5.82	□□□□□ -1.48
TSR4	YOL022C	MSC7	P38694	644 aa		5.81	□□□□□ -1.48
TSR4	YOL022C	ALD4	P46367	519 aa	Known RBP	5.81	□□□□□ -1.48
TSR4	YOL022C	SKP1	P52286	194 aa		5.81	□□□□□ -1.48
TSR4	YOL022C	CWH41	P53008	833 aa		5.81	□□□□□ -1.48
TSR4	YOL022C	RPC31	P17890	251 aa		5.8	□□□□□ -1.48
TSR4	YOL022C	YBR197C	P38306	217 aa		5.8	□□□□□ -1.48
TSR4	YOL022C	TPS3	P38426	1054 aa	Known RBP	5.8	□□□□□ -1.48
TSR4	YOL022C	SRS2	P12954	1174 aa		5.79	□□□□□ -1.48
TSR4	YOL022C	TY1A-DR2	Q03964	440 aa	Known RBP	5.79	□□□□□ -1.48
TSR4	YOL022C	MRPL33	P20084	86 aa		5.78	□□□□□ -1.48
TSR4	YOL022C	FPS1	P23900	669 aa		5.78	□□□□□ -1.48
TSR4	YOL022C	KAP122	P32767	1081 aa		5.78	□□□□□ -1.48
TSR4	YOL022C	MTO1	P53070	669 aa		5.78	□□□□□ -1.48
TSR4	YOL022C	GPM1	P00950	247 aa	Known RBP	5.77	□□□□□ -1.49
TSR4	YOL022C	QDR2	P40474	542 aa		5.77	□□□□□ -1.49
TSR4	YOL022C	YFL066C	P43538	392 aa		5.77	□□□□□ -1.49
TSR4	YOL022C	FOX2	Q02207	900 aa	Known RBP	5.77	□□□□□ -1.49
TSR4	YOL022C	CUS1	Q02554	436 aa	Predicted RBP	5.77	□□□□□ -1.49
TSR4	YOL022C	PUN1	Q06991	263 aa		5.77	□□□□□ -1.49
TSR4	YOL022C	VMA3	P25515	160 aa		5.76	□□□□□ -1.49
TSR4	YOL022C	ISC10	P32645	267 aa		5.76	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms