RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeastyeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDP1YNL039W NTH2P35172 780 aa6.31□□□□□ -1.4
BDP1YNL039W PAC1P39946 494 aaKnown RBP6.31□□□□□ -1.4
BDP1YNL039W VPS16Q03308 798 aa6.31□□□□□ -1.4
BDP1YNL039W RMD1Q03441 430 aa6.31□□□□□ -1.4
BDP1YNL039W SPR28Q04921 423 aa6.31□□□□□ -1.4
BDP1YNL039W HDA3Q06623 655 aa6.31□□□□□ -1.4
BDP1YNL039W MCM2P29469 868 aa6.3□□□□□ -1.4
BDP1YNL039W PPG1P32838 368 aa6.3□□□□□ -1.4
BDP1YNL039W CLN2P20438 545 aa6.29□□□□□ -1.4
BDP1YNL039W HXT10P43581 546 aa6.29□□□□□ -1.4
BDP1YNL039W OSW7P43611 510 aa6.29□□□□□ -1.4
BDP1YNL039W NGR1P32831 672 aaKnown RBP6.29□□□□□ -1.4
BDP1YNL039W TIF11P38912 153 aaKnown RBP6.29□□□□□ -1.4
BDP1YNL039W DAK2P43550 591 aa6.29□□□□□ -1.4
BDP1YNL039W IOC3P43596 787 aa6.29□□□□□ -1.4
BDP1YNL039W CYT1P07143 309 aa6.28□□□□□ -1.4
BDP1YNL039W GCD6P32501 712 aaKnown RBP6.28□□□□□ -1.4
BDP1YNL039W YKL091CP33324 310 aaKnown RBP6.28□□□□□ -1.4
BDP1YNL039W RRP14P36080 434 aaKnown RBP6.28□□□□□ -1.4
BDP1YNL039W FPR3P38911 411 aaKnown RBP6.28□□□□□ -1.4
BDP1YNL039W YJL049WP47048 450 aa6.28□□□□□ -1.4
BDP1YNL039W UFD2P54860 961 aa6.28□□□□□ -1.4
BDP1YNL039W BUD20Q08004 166 aaPredicted RBP6.28□□□□□ -1.4
BDP1YNL039W YBR197CP38306 217 aa6.27□□□□□ -1.41
BDP1YNL039W VNX1P42839 908 aa6.27□□□□□ -1.41
BDP1YNL039W ATG20Q07528 640 aa6.27□□□□□ -1.41
BDP1YNL039W IOC2Q12072 812 aa6.27□□□□□ -1.41
BDP1YNL039W APC11Q12157 165 aa6.27□□□□□ -1.41
BDP1YNL039W CIT2P08679 460 aa6.26□□□□□ -1.41
BDP1YNL039W TPD3P31383 635 aa6.26□□□□□ -1.41
BDP1YNL039W HAP5Q02516 242 aa6.26□□□□□ -1.41
BDP1YNL039W WRS1Q12109 432 aaKnown RBP6.26□□□□□ -1.41
BDP1YNL039W SSF2Q12153 453 aaPredicted RBP6.26□□□□□ -1.41
BDP1YNL039W RPS6AP0CX37 236 aaKnown RBP6.26□□□□□ -1.41
BDP1YNL039W RPS6BP0CX38 236 aaPredicted RBP6.26□□□□□ -1.41
BDP1YNL039W ISC10P32645 267 aa6.26□□□□□ -1.41
BDP1YNL039W NSE3Q05541 303 aa6.26□□□□□ -1.41
BDP1YNL039W PAT1P25644 796 aaKnown RBP6.25□□□□□ -1.41
BDP1YNL039W PEP7P32609 515 aa6.25□□□□□ -1.41
BDP1YNL039W SEC61P32915 480 aa6.25□□□□□ -1.41
BDP1YNL039W RPS26AP39938 119 aaKnown RBP6.25□□□□□ -1.41
BDP1YNL039W RPS26BP39939 119 aaKnown RBP6.25□□□□□ -1.41
BDP1YNL039W RTT106P40161 455 aa6.25□□□□□ -1.41
BDP1YNL039W RRD1P40454 393 aaKnown RBP6.25□□□□□ -1.41
BDP1YNL039W YBL029C-AQ3E756 94 aa6.25□□□□□ -1.41
BDP1YNL039W SIS1P25294 352 aaKnown RBP6.24□□□□□ -1.41
BDP1YNL039W VPS35P34110 944 aa6.24□□□□□ -1.41
BDP1YNL039W RRN7P40992 514 aa6.24□□□□□ -1.41
BDP1YNL039W ALG12P53730 551 aa6.24□□□□□ -1.41
BDP1YNL039W RPN4Q03465 531 aa6.24□□□□□ -1.41
BDP1YNL039W CAB1Q04430 367 aa6.24□□□□□ -1.41
BDP1YNL039W ESF1Q06344 628 aaKnown RBP6.24□□□□□ -1.41
BDP1YNL039W SWI5P08153 709 aa6.23□□□□□ -1.41
BDP1YNL039W STI1P15705 589 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
BDP1YNL039W RPB10P22139 70 aa6.23□□□□□ -1.41
BDP1YNL039W ATG36P46983 293 aa6.23□□□□□ -1.41
BDP1YNL039W MNR2P35724 969 aa6.23□□□□□ -1.41
BDP1YNL039W FOX2Q02207 900 aaKnown RBP6.23□□□□□ -1.41
BDP1YNL039W RTG1P32607 177 aa6.22□□□□□ -1.41
BDP1YNL039W SAM37P50110 327 aa6.22□□□□□ -1.41
BDP1YNL039W YGR122WP53272 402 aa6.22□□□□□ -1.41
BDP1YNL039W PRT1P06103 763 aaKnown RBP6.21□□□□□ -1.41
BDP1YNL039W PET112P33893 541 aa6.21□□□□□ -1.41
BDP1YNL039W ARH1P48360 493 aa6.21□□□□□ -1.41
BDP1YNL039W RTS3P53289 263 aa6.21□□□□□ -1.41
BDP1YNL039W YNL011CP53980 444 aa6.21□□□□□ -1.41
BDP1YNL039W CDC55Q00362 526 aa6.21□□□□□ -1.41
BDP1YNL039W YDL129WQ07555 291 aa6.21□□□□□ -1.41
BDP1YNL039W BDS1Q08347 646 aa6.21□□□□□ -1.41
BDP1YNL039W CYC8P14922 966 aa6.21□□□□□ -1.42
BDP1YNL039W BUD6P41697 788 aa6.21□□□□□ -1.42
BDP1YNL039W TFG1P41895 735 aaPredicted RBP6.21□□□□□ -1.42
BDP1YNL039W SPP1Q03012 353 aa6.21□□□□□ -1.42
BDP1YNL039W OXR1Q08952 273 aa6.21□□□□□ -1.42
BDP1YNL039W CDC53Q12018 815 aaKnown RBP6.21□□□□□ -1.42
BDP1YNL039W YJR008WP47085 338 aa6.2□□□□□ -1.42
BDP1YNL039W BNI4P53858 892 aa6.2□□□□□ -1.42
BDP1YNL039W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
BDP1YNL039W ELP4Q02884 456 aaKnown RBP6.2□□□□□ -1.42
BDP1YNL039W KTR2P33550 425 aa6.19□□□□□ -1.42
BDP1YNL039W NUG1P40010 520 aaKnown RBP6.19□□□□□ -1.42
BDP1YNL039W CWC24P53769 259 aa6.19□□□□□ -1.42
BDP1YNL039W YOR131CQ12486 218 aa6.19□□□□□ -1.42
BDP1YNL039W UTR2P32623 467 aa6.18□□□□□ -1.42
BDP1YNL039W TOM20P35180 183 aa6.18□□□□□ -1.42
BDP1YNL039W PBP2P38151 413 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
BDP1YNL039W SUT1P53032 299 aaKnown RBP6.18□□□□□ -1.42
BDP1YNL039W UBX5Q06682 500 aa6.18□□□□□ -1.42
BDP1YNL039W MOD5P07884 428 aa6.18□□□□□ -1.42
BDP1YNL039W TSR4P25040 408 aa6.18□□□□□ -1.42
BDP1YNL039W CIC1P38779 376 aaKnown RBP6.18□□□□□ -1.42
BDP1YNL039W POB3Q04636 552 aaKnown RBP6.18□□□□□ -1.42
BDP1YNL039W BDF2Q07442 638 aa6.18□□□□□ -1.42
BDP1YNL039W RAD2P07276 1031 aa6.17□□□□□ -1.42
BDP1YNL039W SPT16P32558 1035 aaKnown RBP6.17□□□□□ -1.42
BDP1YNL039W ISU1Q03020 165 aa6.17□□□□□ -1.42
BDP1YNL039W LDB19Q12502 818 aa6.17□□□□□ -1.42
BDP1YNL039W MRPL33P20084 86 aa6.16□□□□□ -1.42
BDP1YNL039W EMW1P42842 904 aaKnown RBP6.16□□□□□ -1.42
BDP1YNL039W MTO1P53070 669 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms