RNA–Protein interactions for RNA: YMR198W

CIK1, Transcript of Kinesin-associated protein, yeastyeast

Gene CIK1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIK1YMR198W YPR204WQ08995 1032 aa6.87□□□□□ -1.31
CIK1YMR198W MSN5P52918 1224 aa6.87□□□□□ -1.31
CIK1YMR198W HPF1Q05164 967 aa6.87□□□□□ -1.31
CIK1YMR198W TBS1P38114 1094 aa6.85□□□□□ -1.31
CIK1YMR198W AIM9P40053 627 aaKnown RBP6.85□□□□□ -1.31
CIK1YMR198W SUM1P46676 1062 aa6.85□□□□□ -1.31
CIK1YMR198W SWI5P08153 709 aa6.84□□□□□ -1.31
CIK1YMR198W YGR035CP53222 116 aa6.82□□□□□ -1.32
CIK1YMR198W YPQ2Q06328 317 aa6.82□□□□□ -1.32
CIK1YMR198W SHM1P37292 490 aaPredicted RBP6.82□□□□□ -1.32
CIK1YMR198W JJJ2P46997 583 aa6.81□□□□□ -1.32
CIK1YMR198W RPS6AP0CX37 236 aaKnown RBP6.8□□□□□ -1.32
CIK1YMR198W RPS6BP0CX38 236 aaPredicted RBP6.8□□□□□ -1.32
CIK1YMR198W UBP15P50101 1230 aa6.8□□□□□ -1.32
CIK1YMR198W CUZ1P53899 274 aa6.8□□□□□ -1.32
CIK1YMR198W PDI1P17967 522 aaKnown RBP6.79□□□□□ -1.32
CIK1YMR198W KTR7P40504 517 aa6.79□□□□□ -1.32
CIK1YMR198W TSC13Q99190 310 aa6.79□□□□□ -1.32
CIK1YMR198W AHP1P38013 176 aaKnown RBP6.78□□□□□ -1.32
CIK1YMR198W TRK2P28584 889 aa6.77□□□□□ -1.33
CIK1YMR198W NTH2P35172 780 aa6.77□□□□□ -1.33
CIK1YMR198W ACS2P52910 683 aaKnown RBP6.77□□□□□ -1.33
CIK1YMR198W ALA1P40825 983 aaKnown RBP6.77□□□□□ -1.33
CIK1YMR198W IRE1P32361 1115 aa6.76□□□□□ -1.33
CIK1YMR198W YFL034WP43564 1073 aa6.76□□□□□ -1.33
CIK1YMR198W RPS31P05759 152 aaKnown RBP6.75□□□□□ -1.33
CIK1YMR198W TTI1P36097 1038 aa6.75□□□□□ -1.33
CIK1YMR198W JJJ3P47138 172 aa6.75□□□□□ -1.33
CIK1YMR198W YNL165WP53891 406 aa6.74□□□□□ -1.33
CIK1YMR198W PSH1Q12161 406 aa6.74□□□□□ -1.33
CIK1YMR198W PHO87P25360 923 aa6.74□□□□□ -1.33
CIK1YMR198W DIT1P21623 536 aa6.73□□□□□ -1.33
CIK1YMR198W PDC6P26263 563 aaKnown RBP6.73□□□□□ -1.33
CIK1YMR198W SIS2P36024 562 aa6.73□□□□□ -1.33
CIK1YMR198W LYS5P50113 272 aa6.73□□□□□ -1.33
CIK1YMR198W DPH6Q12429 685 aa6.73□□□□□ -1.33
CIK1YMR198W MCM1P11746 286 aa6.72□□□□□ -1.33
CIK1YMR198W ROM1P53046 1155 aa6.72□□□□□ -1.33
CIK1YMR198W CYT1P07143 309 aa6.71□□□□□ -1.34
CIK1YMR198W GAL2P13181 574 aa6.71□□□□□ -1.34
CIK1YMR198W TGL4P36165 910 aa6.71□□□□□ -1.34
CIK1YMR198W SYT1Q06836 1226 aa6.7□□□□□ -1.34
CIK1YMR198W UBP1P25037 809 aa6.69□□□□□ -1.34
CIK1YMR198W CPS1P27614 576 aa6.69□□□□□ -1.34
CIK1YMR198W CEM1P39525 442 aa6.69□□□□□ -1.34
CIK1YMR198W ALD2P47771 506 aa6.69□□□□□ -1.34
CIK1YMR198W YMR265CQ03508 461 aaKnown RBP6.69□□□□□ -1.34
CIK1YMR198W HAP4P14064 554 aa6.69□□□□□ -1.34
CIK1YMR198W GAS4Q08271 471 aa6.69□□□□□ -1.34
CIK1YMR198W KRE33P53914 1056 aaKnown RBP6.68□□□□□ -1.34
CIK1YMR198W YDR461C-AQ2V2P7 80 aa6.68□□□□□ -1.34
CIK1YMR198W MLF3P32047 452 aa6.67□□□□□ -1.34
CIK1YMR198W ECM23Q02710 187 aa6.67□□□□□ -1.34
CIK1YMR198W LEU1P07264 779 aaKnown RBP6.66□□□□□ -1.34
CIK1YMR198W PUP1P25043 261 aa6.66□□□□□ -1.34
CIK1YMR198W ADE12P80210 433 aaKnown RBP6.66□□□□□ -1.34
CIK1YMR198W MRPL16P38064 232 aa6.65□□□□□ -1.34
CIK1YMR198W Q0182Q9ZZW1 134 aa6.65□□□□□ -1.34
CIK1YMR198W HXT5P38695 592 aa6.64□□□□□ -1.35
CIK1YMR198W STB3Q12427 513 aa6.64□□□□□ -1.35
CIK1YMR198W NGR1P32831 672 aaKnown RBP6.64□□□□□ -1.35
CIK1YMR198W SPR3P41901 512 aa6.64□□□□□ -1.35
CIK1YMR198W SUV3P32580 737 aa6.62□□□□□ -1.35
CIK1YMR198W MDJ1P35191 511 aa6.62□□□□□ -1.35
CIK1YMR198W UBX7P38349 436 aa6.61□□□□□ -1.35
CIK1YMR198W YFL066CP43538 392 aa6.61□□□□□ -1.35
CIK1YMR198W RGP1P16664 663 aa6.59□□□□□ -1.35
CIK1YMR198W YML083CQ04526 418 aa6.59□□□□□ -1.35
CIK1YMR198W UTP4Q06679 776 aaKnown RBP6.59□□□□□ -1.35
CIK1YMR198W FPS1P23900 669 aa6.59□□□□□ -1.35
CIK1YMR198W MSC7P38694 644 aa6.59□□□□□ -1.35
CIK1YMR198W CAB1Q04430 367 aa6.59□□□□□ -1.35
CIK1YMR198W NOB1Q08444 459 aaKnown RBP6.59□□□□□ -1.35
CIK1YMR198W VAN1P23642 535 aa6.58□□□□□ -1.36
CIK1YMR198W SCD5P34758 872 aa6.58□□□□□ -1.36
CIK1YMR198W YTA6P40328 754 aa6.58□□□□□ -1.36
CIK1YMR198W GPM1P00950 247 aaKnown RBP6.57□□□□□ -1.36
CIK1YMR198W AI1P03875 834 aa6.56□□□□□ -1.36
CIK1YMR198W MTO1P53070 669 aa6.56□□□□□ -1.36
CIK1YMR198W TY1A-DR2Q03964 440 aaKnown RBP6.56□□□□□ -1.36
CIK1YMR198W SBE2P42223 864 aaKnown RBP6.55□□□□□ -1.36
CIK1YMR198W TRS33Q99394 268 aa6.55□□□□□ -1.36
CIK1YMR198W ICP55P40051 511 aa6.54□□□□□ -1.36
CIK1YMR198W NSG2P53898 299 aa6.54□□□□□ -1.36
CIK1YMR198W THI72Q08579 599 aa6.54□□□□□ -1.36
CIK1YMR198W SSA4P22202 642 aaKnown RBP6.54□□□□□ -1.36
CIK1YMR198W SKP1P52286 194 aa6.54□□□□□ -1.36
CIK1YMR198W RPC31P17890 251 aa6.53□□□□□ -1.36
CIK1YMR198W CUS1Q02554 436 aaPredicted RBP6.53□□□□□ -1.36
CIK1YMR198W PDC5P16467 563 aaKnown RBP6.52□□□□□ -1.37
CIK1YMR198W FOX2Q02207 900 aaKnown RBP6.52□□□□□ -1.37
CIK1YMR198W PHM7Q12252 991 aa6.52□□□□□ -1.37
CIK1YMR198W KAP122P32767 1081 aa6.52□□□□□ -1.37
CIK1YMR198W YBR197CP38306 217 aa6.52□□□□□ -1.37
CIK1YMR198W QDR2P40474 542 aa6.52□□□□□ -1.37
CIK1YMR198W ALD4P46367 519 aaKnown RBP6.52□□□□□ -1.37
CIK1YMR198W KNS1P32350 737 aaPredicted RBP6.5□□□□□ -1.37
CIK1YMR198W NAB2P32505 525 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
CIK1YMR198W CWH41P53008 833 aa6.5□□□□□ -1.37
CIK1YMR198W MTC5Q03897 1148 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms