RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	TIF1	P10081	395 aa	Known RBP	4.91	□□□□□ -1.62
UBC7	YMR022W	SIS2	P36024	562 aa		4.91	□□□□□ -1.62
UBC7	YMR022W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
UBC7	YMR022W	HAL5	P38970	855 aa	Known RBP	4.9	□□□□□ -1.63
UBC7	YMR022W	AIM9	P40053	627 aa	Known RBP	4.9	□□□□□ -1.63
UBC7	YMR022W	YMR265C	Q03508	461 aa	Known RBP	4.9	□□□□□ -1.63
UBC7	YMR022W	SSN3	P39073	555 aa		4.89	□□□□□ -1.63
UBC7	YMR022W	ATG32	P40458	529 aa		4.89	□□□□□ -1.63
UBC7	YMR022W	SLX8	P40072	274 aa		4.88	□□□□□ -1.63
UBC7	YMR022W	YTA6	P40328	754 aa		4.88	□□□□□ -1.63
UBC7	YMR022W	CUZ1	P53899	274 aa		4.88	□□□□□ -1.63
UBC7	YMR022W	MTC5	Q03897	1148 aa		4.88	□□□□□ -1.63
UBC7	YMR022W	PUS1	Q12211	544 aa	Known RBP	4.88	□□□□□ -1.63
UBC7	YMR022W	DIT1	P21623	536 aa		4.87	□□□□□ -1.63
UBC7	YMR022W	KRE33	P53914	1056 aa	Known RBP	4.87	□□□□□ -1.63
UBC7	YMR022W	ENO1	P00924	437 aa	Known RBP	4.86	□□□□□ -1.63
UBC7	YMR022W	IRE1	P32361	1115 aa		4.86	□□□□□ -1.63
UBC7	YMR022W	JJJ2	P46997	583 aa		4.86	□□□□□ -1.63
UBC7	YMR022W	JJJ3	P47138	172 aa		4.86	□□□□□ -1.63
UBC7	YMR022W	ADE12	P80210	433 aa	Known RBP	4.86	□□□□□ -1.63
UBC7	YMR022W	TSC13	Q99190	310 aa		4.86	□□□□□ -1.63
UBC7	YMR022W	SWI5	P08153	709 aa		4.85	□□□□□ -1.63
UBC7	YMR022W	RPS6A	P0CX37	236 aa	Known RBP	4.85	□□□□□ -1.63
UBC7	YMR022W	RPS6B	P0CX38	236 aa	Predicted RBP	4.85	□□□□□ -1.63
UBC7	YMR022W	ICP55	P40051	511 aa		4.85	□□□□□ -1.63
UBC7	YMR022W	NAM8	Q00539	523 aa	Known RBP	4.85	□□□□□ -1.63
UBC7	YMR022W	PHM7	Q12252	991 aa		4.85	□□□□□ -1.63
UBC7	YMR022W	CCP1	P00431	361 aa		4.84	□□□□□ -1.63
UBC7	YMR022W	AI1	P03875	834 aa		4.84	□□□□□ -1.63
UBC7	YMR022W	HAP4	P14064	554 aa		4.84	□□□□□ -1.63
UBC7	YMR022W	PDI1	P17967	522 aa	Known RBP	4.84	□□□□□ -1.63
UBC7	YMR022W	FPS1	P23900	669 aa		4.84	□□□□□ -1.63
UBC7	YMR022W	NTH2	P35172	780 aa		4.84	□□□□□ -1.63
UBC7	YMR022W	MRX10	Q05648	414 aa		4.84	□□□□□ -1.63
UBC7	YMR022W	SLA1	P32790	1244 aa		4.83	□□□□□ -1.64
UBC7	YMR022W	YDR461C-A	Q2V2P7	80 aa		4.83	□□□□□ -1.64
UBC7	YMR022W	KTR7	P40504	517 aa		4.82	□□□□□ -1.64
UBC7	YMR022W	CYT1	P07143	309 aa		4.81	□□□□□ -1.64
UBC7	YMR022W	MCM1	P11746	286 aa		4.81	□□□□□ -1.64
UBC7	YMR022W	RDS2	P19541	446 aa	Known RBP	4.81	□□□□□ -1.64
UBC7	YMR022W	PHO87	P25360	923 aa		4.81	□□□□□ -1.64
UBC7	YMR022W	NSG2	P53898	299 aa		4.81	□□□□□ -1.64
UBC7	YMR022W	SYT1	Q06836	1226 aa		4.81	□□□□□ -1.64
UBC7	YMR022W	THI72	Q08579	599 aa		4.81	□□□□□ -1.64
UBC7	YMR022W	MRPL16	P38064	232 aa		4.8	□□□□□ -1.64
UBC7	YMR022W	CWH41	P53008	833 aa		4.8	□□□□□ -1.64
UBC7	YMR022W	DMA2	P53924	522 aa		4.8	□□□□□ -1.64
UBC7	YMR022W	GAS4	Q08271	471 aa		4.8	□□□□□ -1.64
UBC7	YMR022W	STB3	Q12427	513 aa		4.8	□□□□□ -1.64
UBC7	YMR022W	TY1A-DR3	Q12441	440 aa		4.8	□□□□□ -1.64
UBC7	YMR022W	MET1	P36150	593 aa		4.79	□□□□□ -1.64
UBC7	YMR022W	PDC6	P26263	563 aa	Known RBP	4.78	□□□□□ -1.64
UBC7	YMR022W	YNR014W	P53719	212 aa		4.78	□□□□□ -1.64
UBC7	YMR022W	YPQ2	Q06328	317 aa		4.78	□□□□□ -1.64
UBC7	YMR022W	VAN1	P23642	535 aa		4.77	□□□□□ -1.65
UBC7	YMR022W	SCD5	P34758	872 aa		4.77	□□□□□ -1.65
UBC7	YMR022W	GAL2	P13181	574 aa		4.76	□□□□□ -1.65
UBC7	YMR022W	PEP12	P32854	288 aa		4.76	□□□□□ -1.65
UBC7	YMR022W	ACS2	P52910	683 aa	Known RBP	4.76	□□□□□ -1.65
UBC7	YMR022W	PSH1	Q12161	406 aa		4.76	□□□□□ -1.65
UBC7	YMR022W	Q0182	Q9ZZW1	134 aa		4.76	□□□□□ -1.65
UBC7	YMR022W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
UBC7	YMR022W	SHM1	P37292	490 aa	Predicted RBP	4.75	□□□□□ -1.65
UBC7	YMR022W	TRS33	Q99394	268 aa		4.75	□□□□□ -1.65
UBC7	YMR022W	MLF3	P32047	452 aa		4.74	□□□□□ -1.65
UBC7	YMR022W	MDJ1	P35191	511 aa		4.74	□□□□□ -1.65
UBC7	YMR022W	MTO1	P53070	669 aa		4.74	□□□□□ -1.65
UBC7	YMR022W	UTP4	Q06679	776 aa	Known RBP	4.74	□□□□□ -1.65
UBC7	YMR022W	YPR053C	Q6Q5F3	151 aa		4.74	□□□□□ -1.65
UBC7	YMR022W	LEU1	P07264	779 aa	Known RBP	4.73	□□□□□ -1.65
UBC7	YMR022W	RGP1	P16664	663 aa		4.73	□□□□□ -1.65
UBC7	YMR022W	UBP1	P25037	809 aa		4.73	□□□□□ -1.65
UBC7	YMR022W	NCL1	P38205	684 aa	Known RBP	4.73	□□□□□ -1.65
UBC7	YMR022W	SPR3	P41901	512 aa		4.73	□□□□□ -1.65
UBC7	YMR022W	ECM23	Q02710	187 aa		4.73	□□□□□ -1.65
UBC7	YMR022W	HEH2	Q03281	663 aa		4.73	□□□□□ -1.65
UBC7	YMR022W	KNS1	P32350	737 aa	Predicted RBP	4.72	□□□□□ -1.65
UBC7	YMR022W	TGL4	P36165	910 aa		4.72	□□□□□ -1.65
UBC7	YMR022W	BOI2	P39969	1040 aa		4.72	□□□□□ -1.65
UBC7	YMR022W	LSB3	P43603	459 aa	Known RBP	4.72	□□□□□ -1.65
UBC7	YMR022W	YMR187C	Q03236	431 aa		4.72	□□□□□ -1.65
UBC7	YMR022W	GPM1	P00950	247 aa	Known RBP	4.71	□□□□□ -1.66
UBC7	YMR022W	SSA4	P22202	642 aa	Known RBP	4.71	□□□□□ -1.66
UBC7	YMR022W	NGR1	P32831	672 aa	Known RBP	4.71	□□□□□ -1.66
UBC7	YMR022W	RPS31	P05759	152 aa	Known RBP	4.7	□□□□□ -1.66
UBC7	YMR022W	SBP1	P10080	294 aa	Known RBP	4.7	□□□□□ -1.66
UBC7	YMR022W	UBX7	P38349	436 aa		4.7	□□□□□ -1.66
UBC7	YMR022W	YBR287W	P38355	427 aa		4.7	□□□□□ -1.66
UBC7	YMR022W	KAP122	P32767	1081 aa		4.69	□□□□□ -1.66
UBC7	YMR022W	TTI1	P36097	1038 aa		4.69	□□□□□ -1.66
UBC7	YMR022W	ROM1	P53046	1155 aa		4.69	□□□□□ -1.66
UBC7	YMR022W	TDA6	Q06466	467 aa		4.69	□□□□□ -1.66
UBC7	YMR022W	PDC5	P16467	563 aa	Known RBP	4.68	□□□□□ -1.66
UBC7	YMR022W	YNL165W	P53891	406 aa		4.68	□□□□□ -1.66
UBC7	YMR022W	CPS1	P27614	576 aa		4.67	□□□□□ -1.66
UBC7	YMR022W	APM2	P38700	605 aa		4.67	□□□□□ -1.66
UBC7	YMR022W	SBE2	P42223	864 aa	Known RBP	4.67	□□□□□ -1.66
UBC7	YMR022W	ALD2	P47771	506 aa		4.67	□□□□□ -1.66
UBC7	YMR022W	TY1A-DR2	Q03964	440 aa	Known RBP	4.67	□□□□□ -1.66
UBC7	YMR022W	PUF6	Q04373	656 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms