RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W YBL036CP38197 257 aa6□□□□□ -1.45
SEC22YLR268W HAL5P38970 855 aaKnown RBP6□□□□□ -1.45
SEC22YLR268W ATG3P40344 310 aa6□□□□□ -1.45
SEC22YLR268W SBE2P42223 864 aaKnown RBP6□□□□□ -1.45
SEC22YLR268W NRD1P53617 575 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
SEC22YLR268W TDA6Q06466 467 aa6□□□□□ -1.45
SEC22YLR268W SLX8P40072 274 aa5.99□□□□□ -1.45
SEC22YLR268W JJJ2P46997 583 aa5.99□□□□□ -1.45
SEC22YLR268W RQC2Q12532 1038 aaKnown RBP5.99□□□□□ -1.45
SEC22YLR268W UTP7P40055 554 aaKnown RBP5.98□□□□□ -1.45
SEC22YLR268W YPP1P46951 817 aa5.98□□□□□ -1.45
SEC22YLR268W YMR187CQ03236 431 aa5.98□□□□□ -1.45
SEC22YLR268W GPM1P00950 247 aaKnown RBP5.97□□□□□ -1.45
SEC22YLR268W YDJ1P25491 409 aaKnown RBP5.97□□□□□ -1.45
SEC22YLR268W IRE1P32361 1115 aa5.97□□□□□ -1.45
SEC22YLR268W MCX1P38323 520 aaPredicted RBP5.97□□□□□ -1.45
SEC22YLR268W RPN1P38764 993 aaKnown RBP5.97□□□□□ -1.45
SEC22YLR268W ALA1P40825 983 aaKnown RBP5.96□□□□□ -1.46
SEC22YLR268W FPS1P23900 669 aa5.95□□□□□ -1.46
SEC22YLR268W BRL1P38770 471 aa5.95□□□□□ -1.46
SEC22YLR268W SHM1P37292 490 aaPredicted RBP5.94□□□□□ -1.46
SEC22YLR268W SOH1P38633 127 aa5.94□□□□□ -1.46
SEC22YLR268W YNR014WP53719 212 aa5.94□□□□□ -1.46
SEC22YLR268W HDA3Q06623 655 aa5.94□□□□□ -1.46
SEC22YLR268W PSH1Q12161 406 aa5.93□□□□□ -1.46
SEC22YLR268W SBP1P10080 294 aaKnown RBP5.92□□□□□ -1.46
SEC22YLR268W PDC6P26263 563 aaKnown RBP5.92□□□□□ -1.46
SEC22YLR268W KNS1P32350 737 aaPredicted RBP5.91□□□□□ -1.46
SEC22YLR268W SUP45P12385 437 aaKnown RBP5.9□□□□□ -1.46
SEC22YLR268W YCK2P23292 546 aaKnown RBP5.9□□□□□ -1.46
SEC22YLR268W BIO2P32451 375 aa5.9□□□□□ -1.46
SEC22YLR268W MET1P36150 593 aa5.9□□□□□ -1.46
SEC22YLR268W MRPL16P38064 232 aa5.9□□□□□ -1.46
SEC22YLR268W BOI2P39969 1040 aa5.9□□□□□ -1.46
SEC22YLR268W TFB3Q03290 321 aa5.9□□□□□ -1.46
SEC22YLR268W YPQ2Q06328 317 aa5.9□□□□□ -1.46
SEC22YLR268W PDC5P16467 563 aaKnown RBP5.89□□□□□ -1.47
SEC22YLR268W YDR215CQ12240 137 aa5.89□□□□□ -1.47
SEC22YLR268W RPS31P05759 152 aaKnown RBP5.88□□□□□ -1.47
SEC22YLR268W SPR3P41901 512 aa5.88□□□□□ -1.47
SEC22YLR268W STB3Q12427 513 aa5.88□□□□□ -1.47
SEC22YLR268W RPP1AP05318 106 aaPredicted RBP5.87□□□□□ -1.47
SEC22YLR268W LEU1P07264 779 aaKnown RBP5.87□□□□□ -1.47
SEC22YLR268W TY1A-DR2Q03964 440 aaKnown RBP5.87□□□□□ -1.47
SEC22YLR268W SWI5P08153 709 aa5.86□□□□□ -1.47
SEC22YLR268W PKC1P24583 1151 aa5.86□□□□□ -1.47
SEC22YLR268W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SEC22YLR268W ENO2P00925 437 aaKnown RBP5.85□□□□□ -1.47
SEC22YLR268W MCM1P11746 286 aa5.85□□□□□ -1.47
SEC22YLR268W RIM21P48565 533 aa5.85□□□□□ -1.47
SEC22YLR268W AMN1P38285 549 aaPredicted RBP5.84□□□□□ -1.47
SEC22YLR268W SLN1P39928 1220 aaPredicted RBP5.83□□□□□ -1.48
SEC22YLR268W AIM9P40053 627 aaKnown RBP5.83□□□□□ -1.48
SEC22YLR268W YFL034WP43564 1073 aa5.83□□□□□ -1.48
SEC22YLR268W ALD2P47771 506 aa5.83□□□□□ -1.48
SEC22YLR268W YNL108CP53929 270 aa5.83□□□□□ -1.48
SEC22YLR268W MSC7P38694 644 aa5.82□□□□□ -1.48
SEC22YLR268W RDS2P19541 446 aaKnown RBP5.81□□□□□ -1.48
SEC22YLR268W RPS6AP0CX37 236 aaKnown RBP5.8□□□□□ -1.48
SEC22YLR268W RPS6BP0CX38 236 aaPredicted RBP5.8□□□□□ -1.48
SEC22YLR268W RGP1P16664 663 aa5.8□□□□□ -1.48
SEC22YLR268W TAT1P38085 619 aa5.8□□□□□ -1.48
SEC22YLR268W YTA6P40328 754 aa5.8□□□□□ -1.48
SEC22YLR268W LSB6P42951 607 aa5.8□□□□□ -1.48
SEC22YLR268W MCA1Q08601 432 aa5.79□□□□□ -1.48
SEC22YLR268W YNL165WP53891 406 aa5.78□□□□□ -1.48
SEC22YLR268W TPS3P38426 1054 aaKnown RBP5.76□□□□□ -1.49
SEC22YLR268W HEH2Q03281 663 aa5.76□□□□□ -1.49
SEC22YLR268W MLF3P32047 452 aa5.75□□□□□ -1.49
SEC22YLR268W NTH2P35172 780 aa5.75□□□□□ -1.49
SEC22YLR268W MRX10Q05648 414 aa5.75□□□□□ -1.49
SEC22YLR268W TSC13Q99190 310 aa5.75□□□□□ -1.49
SEC22YLR268W PRY1P47032 299 aa5.74□□□□□ -1.49
SEC22YLR268W YPL034WQ03083 165 aa5.74□□□□□ -1.49
SEC22YLR268W UTP4Q06679 776 aaKnown RBP5.73□□□□□ -1.49
SEC22YLR268W NHA1Q99271 985 aa5.73□□□□□ -1.49
SEC22YLR268W YJL007CP47080 104 aa5.72□□□□□ -1.49
SEC22YLR268W Q0182Q9ZZW1 134 aa5.72□□□□□ -1.49
SEC22YLR268W PDI1P17967 522 aaKnown RBP5.71□□□□□ -1.5
SEC22YLR268W SKP1P52286 194 aa5.71□□□□□ -1.5
SEC22YLR268W ENO1P00924 437 aaKnown RBP5.7□□□□□ -1.5
SEC22YLR268W CYT1P07143 309 aa5.7□□□□□ -1.5
SEC22YLR268W MAC1P35192 417 aa5.7□□□□□ -1.5
SEC22YLR268W PGM2P37012 569 aaKnown RBP5.7□□□□□ -1.5
SEC22YLR268W ALG14P38242 237 aa5.7□□□□□ -1.5
SEC22YLR268W PRK1P40494 810 aa5.7□□□□□ -1.5
SEC22YLR268W BUD9P53226 547 aa5.7□□□□□ -1.5
SEC22YLR268W PEP12P32854 288 aa5.69□□□□□ -1.5
SEC22YLR268W UBP1P25037 809 aa5.68□□□□□ -1.5
SEC22YLR268W NCL1P38205 684 aaKnown RBP5.68□□□□□ -1.5
SEC22YLR268W NAR1P23503 491 aaKnown RBP5.67□□□□□ -1.5
SEC22YLR268W SCD5P34758 872 aa5.67□□□□□ -1.5
SEC22YLR268W MTO1P53070 669 aa5.67□□□□□ -1.5
SEC22YLR268W GIS4Q04233 774 aa5.67□□□□□ -1.5
SEC22YLR268W AI3P03877 415 aa5.66□□□□□ -1.5
SEC22YLR268W TIF1P10081 395 aaKnown RBP5.66□□□□□ -1.5
SEC22YLR268W PGM1P33401 570 aaKnown RBP5.65□□□□□ -1.5
SEC22YLR268W BIM1P40013 344 aa5.65□□□□□ -1.5
SEC22YLR268W PHO87P25360 923 aa5.64□□□□□ -1.51
SEC22YLR268W RTG2P32608 588 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms