RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C TY1A-MR1Q04215 440 aa6.86□□□□□ -1.31
ATG38YLR211C TBS1P38114 1094 aa6.85□□□□□ -1.31
ATG38YLR211C SWI5P08153 709 aa6.84□□□□□ -1.31
ATG38YLR211C AIM9P40053 627 aaKnown RBP6.84□□□□□ -1.31
ATG38YLR211C SUM1P46676 1062 aa6.84□□□□□ -1.31
ATG38YLR211C MSN5P52918 1224 aa6.83□□□□□ -1.32
ATG38YLR211C PDI1P17967 522 aaKnown RBP6.82□□□□□ -1.32
ATG38YLR211C TTI1P36097 1038 aa6.82□□□□□ -1.32
ATG38YLR211C KTR7P40504 517 aa6.82□□□□□ -1.32
ATG38YLR211C YPQ2Q06328 317 aa6.82□□□□□ -1.32
ATG38YLR211C SHM1P37292 490 aaPredicted RBP6.81□□□□□ -1.32
ATG38YLR211C RPS6AP0CX37 236 aaKnown RBP6.8□□□□□ -1.32
ATG38YLR211C RPS6BP0CX38 236 aaPredicted RBP6.8□□□□□ -1.32
ATG38YLR211C NTH2P35172 780 aa6.8□□□□□ -1.32
ATG38YLR211C HPF1Q05164 967 aa6.8□□□□□ -1.32
ATG38YLR211C TSC13Q99190 310 aa6.8□□□□□ -1.32
ATG38YLR211C ACS2P52910 683 aaKnown RBP6.79□□□□□ -1.32
ATG38YLR211C JJJ2P46997 583 aa6.78□□□□□ -1.32
ATG38YLR211C RPS31P05759 152 aaKnown RBP6.76□□□□□ -1.33
ATG38YLR211C PHO87P25360 923 aa6.76□□□□□ -1.33
ATG38YLR211C ALA1P40825 983 aaKnown RBP6.76□□□□□ -1.33
ATG38YLR211C YFL034WP43564 1073 aa6.76□□□□□ -1.33
ATG38YLR211C UBP15P50101 1230 aa6.76□□□□□ -1.33
ATG38YLR211C GAL2P13181 574 aa6.75□□□□□ -1.33
ATG38YLR211C CPS1P27614 576 aa6.75□□□□□ -1.33
ATG38YLR211C SIS2P36024 562 aa6.75□□□□□ -1.33
ATG38YLR211C TGL4P36165 910 aa6.75□□□□□ -1.33
ATG38YLR211C YGR035CP53222 116 aa6.75□□□□□ -1.33
ATG38YLR211C YNL165WP53891 406 aa6.75□□□□□ -1.33
ATG38YLR211C CUZ1P53899 274 aa6.75□□□□□ -1.33
ATG38YLR211C IRE1P32361 1115 aa6.74□□□□□ -1.33
ATG38YLR211C AHP1P38013 176 aaKnown RBP6.74□□□□□ -1.33
ATG38YLR211C ROM1P53046 1155 aa6.74□□□□□ -1.33
ATG38YLR211C PSH1Q12161 406 aa6.73□□□□□ -1.33
ATG38YLR211C CYT1P07143 309 aa6.72□□□□□ -1.33
ATG38YLR211C MCM1P11746 286 aa6.72□□□□□ -1.33
ATG38YLR211C HAP4P14064 554 aa6.71□□□□□ -1.34
ATG38YLR211C PUP1P25043 261 aa6.71□□□□□ -1.34
ATG38YLR211C PDC6P26263 563 aaKnown RBP6.71□□□□□ -1.34
ATG38YLR211C TRK2P28584 889 aa6.71□□□□□ -1.34
ATG38YLR211C ECM23Q02710 187 aa6.7□□□□□ -1.34
ATG38YLR211C GAS4Q08271 471 aa6.7□□□□□ -1.34
ATG38YLR211C DIT1P21623 536 aa6.69□□□□□ -1.34
ATG38YLR211C UBP1P25037 809 aa6.68□□□□□ -1.34
ATG38YLR211C JJJ3P47138 172 aa6.68□□□□□ -1.34
ATG38YLR211C LYS5P50113 272 aa6.68□□□□□ -1.34
ATG38YLR211C ALD2P47771 506 aa6.67□□□□□ -1.34
ATG38YLR211C YMR265CQ03508 461 aaKnown RBP6.67□□□□□ -1.34
ATG38YLR211C SYT1Q06836 1226 aa6.67□□□□□ -1.34
ATG38YLR211C DPH6Q12429 685 aa6.67□□□□□ -1.34
ATG38YLR211C LEU1P07264 779 aaKnown RBP6.66□□□□□ -1.34
ATG38YLR211C MLF3P32047 452 aa6.66□□□□□ -1.34
ATG38YLR211C SUV3P32580 737 aa6.66□□□□□ -1.34
ATG38YLR211C YML083CQ04526 418 aa6.66□□□□□ -1.34
ATG38YLR211C Q0182Q9ZZW1 134 aa6.66□□□□□ -1.34
ATG38YLR211C NGR1P32831 672 aaKnown RBP6.65□□□□□ -1.34
ATG38YLR211C HXT5P38695 592 aa6.65□□□□□ -1.34
ATG38YLR211C CEM1P39525 442 aa6.65□□□□□ -1.34
ATG38YLR211C KRE33P53914 1056 aaKnown RBP6.65□□□□□ -1.34
ATG38YLR211C NOB1Q08444 459 aaKnown RBP6.65□□□□□ -1.34
ATG38YLR211C MRPL16P38064 232 aa6.64□□□□□ -1.35
ATG38YLR211C UBX7P38349 436 aa6.64□□□□□ -1.35
ATG38YLR211C ADE12P80210 433 aaKnown RBP6.63□□□□□ -1.35
ATG38YLR211C YDR461C-AQ2V2P7 80 aa6.63□□□□□ -1.35
ATG38YLR211C SPR3P41901 512 aa6.62□□□□□ -1.35
ATG38YLR211C STB3Q12427 513 aa6.62□□□□□ -1.35
ATG38YLR211C VAN1P23642 535 aa6.61□□□□□ -1.35
ATG38YLR211C RLF2Q12495 606 aa6.61□□□□□ -1.35
ATG38YLR211C RGP1P16664 663 aa6.59□□□□□ -1.35
ATG38YLR211C SSA4P22202 642 aaKnown RBP6.59□□□□□ -1.35
ATG38YLR211C CAB1Q04430 367 aa6.59□□□□□ -1.35
ATG38YLR211C SCD5P34758 872 aa6.57□□□□□ -1.36
ATG38YLR211C MDJ1P35191 511 aa6.57□□□□□ -1.36
ATG38YLR211C MSC7P38694 644 aa6.57□□□□□ -1.36
ATG38YLR211C YTA6P40328 754 aa6.57□□□□□ -1.36
ATG38YLR211C UTP4Q06679 776 aaKnown RBP6.57□□□□□ -1.36
ATG38YLR211C TRS33Q99394 268 aa6.57□□□□□ -1.36
ATG38YLR211C YFL066CP43538 392 aa6.56□□□□□ -1.36
ATG38YLR211C SUB2Q07478 446 aaKnown RBP6.56□□□□□ -1.36
ATG38YLR211C FPS1P23900 669 aa6.55□□□□□ -1.36
ATG38YLR211C YBR197CP38306 217 aa6.55□□□□□ -1.36
ATG38YLR211C MTO1P53070 669 aa6.55□□□□□ -1.36
ATG38YLR211C TY1A-DR2Q03964 440 aaKnown RBP6.55□□□□□ -1.36
ATG38YLR211C CWC15Q03772 175 aaKnown RBP6.54□□□□□ -1.36
ATG38YLR211C GPM1P00950 247 aaKnown RBP6.53□□□□□ -1.36
ATG38YLR211C KAP122P32767 1081 aa6.53□□□□□ -1.36
ATG38YLR211C TPS3P38426 1054 aaKnown RBP6.53□□□□□ -1.36
ATG38YLR211C ALD4P46367 519 aaKnown RBP6.53□□□□□ -1.36
ATG38YLR211C SKP1P52286 194 aa6.53□□□□□ -1.36
ATG38YLR211C RPC31P17890 251 aa6.52□□□□□ -1.37
ATG38YLR211C NAB2P32505 525 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
ATG38YLR211C QDR2P40474 542 aa6.52□□□□□ -1.37
ATG38YLR211C CWH41P53008 833 aa6.52□□□□□ -1.37
ATG38YLR211C YNR040WP53736 256 aa6.52□□□□□ -1.37
ATG38YLR211C FOX2Q02207 900 aaKnown RBP6.52□□□□□ -1.37
ATG38YLR211C PUF6Q04373 656 aaKnown RBP6.52□□□□□ -1.37
ATG38YLR211C MRPL33P20084 86 aa6.51□□□□□ -1.37
ATG38YLR211C SBE2P42223 864 aaKnown RBP6.51□□□□□ -1.37
ATG38YLR211C CUS1Q02554 436 aaPredicted RBP6.51□□□□□ -1.37
ATG38YLR211C PUN1Q06991 263 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms