RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W IES2P40154 320 aa2.53□□□□□ -2
SLX4YLR135W BRE4Q07660 1125 aa2.53□□□□□ -2
SLX4YLR135W MSN5P52918 1224 aa2.53□□□□□ -2
SLX4YLR135W NHA1Q99271 985 aa2.53□□□□□ -2
SLX4YLR135W KIN1P13185 1064 aa2.52□□□□□ -2.01
SLX4YLR135W RNQ1P25367 405 aa2.52□□□□□ -2.01
SLX4YLR135W BUD9P53226 547 aa2.52□□□□□ -2.01
SLX4YLR135W DMA2P53924 522 aa2.52□□□□□ -2.01
SLX4YLR135W NIS1P53939 407 aa2.52□□□□□ -2.01
SLX4YLR135W TRP3P00937 484 aa2.51□□□□□ -2.01
SLX4YLR135W GLC3P32775 704 aa2.51□□□□□ -2.01
SLX4YLR135W PGM1P33401 570 aaKnown RBP2.51□□□□□ -2.01
SLX4YLR135W RPP1AP05318 106 aaPredicted RBP2.5□□□□□ -2.01
SLX4YLR135W DIT2P21595 489 aa2.5□□□□□ -2.01
SLX4YLR135W ESC8Q08119 714 aa2.5□□□□□ -2.01
SLX4YLR135W SAC7P17121 654 aa2.5□□□□□ -2.01
SLX4YLR135W NIT1P40447 199 aa2.5□□□□□ -2.01
SLX4YLR135W ITT1Q04638 464 aa2.5□□□□□ -2.01
SLX4YLR135W AI3P03877 415 aa2.49□□□□□ -2.01
SLX4YLR135W HGH1P48362 394 aaKnown RBP2.49□□□□□ -2.01
SLX4YLR135W MCM16Q12262 181 aa2.49□□□□□ -2.01
SLX4YLR135W RLF2Q12495 606 aa2.49□□□□□ -2.01
SLX4YLR135W ARI1P53111 347 aaKnown RBP2.48□□□□□ -2.01
SLX4YLR135W CTH1P47976 325 aa2.48□□□□□ -2.01
SLX4YLR135W ATF2P53296 535 aa2.48□□□□□ -2.01
SLX4YLR135W HPC2Q01448 625 aa2.48□□□□□ -2.01
SLX4YLR135W GIP4P39732 760 aa2.47□□□□□ -2.01
SLX4YLR135W FPK1P53739 893 aa2.47□□□□□ -2.01
SLX4YLR135W PRP43P53131 767 aaKnown RBP2.46□□□□□ -2.01
SLX4YLR135W ALG14P38242 237 aa2.46□□□□□ -2.02
SLX4YLR135W GUA1P38625 525 aaKnown RBP2.46□□□□□ -2.02
SLX4YLR135W SSA2P10592 639 aaKnown RBP2.45□□□□□ -2.02
SLX4YLR135W SLA1P32790 1244 aa2.45□□□□□ -2.02
SLX4YLR135W YLR122CQ12312 125 aa2.45□□□□□ -2.02
SLX4YLR135W CHS2P14180 963 aa2.45□□□□□ -2.02
SLX4YLR135W MRPL16P38064 232 aa2.45□□□□□ -2.02
SLX4YLR135W TY1A-DR2Q03964 440 aaKnown RBP2.45□□□□□ -2.02
SLX4YLR135W ISU1Q03020 165 aa2.44□□□□□ -2.02
SLX4YLR135W MAG2Q06436 670 aaKnown RBP2.44□□□□□ -2.02
SLX4YLR135W STB3Q12427 513 aa2.44□□□□□ -2.02
SLX4YLR135W SFA1P32771 386 aa2.42□□□□□ -2.02
SLX4YLR135W PGM2P37012 569 aaKnown RBP2.42□□□□□ -2.02
SLX4YLR135W BRL1P38770 471 aa2.42□□□□□ -2.02
SLX4YLR135W SSN3P39073 555 aa2.42□□□□□ -2.02
SLX4YLR135W ALA1P40825 983 aaKnown RBP2.42□□□□□ -2.02
SLX4YLR135W TFB3Q03290 321 aa2.42□□□□□ -2.02
SLX4YLR135W GSF2Q04697 403 aaKnown RBP2.42□□□□□ -2.02
SLX4YLR135W CSN12P47130 423 aa2.42□□□□□ -2.02
SLX4YLR135W ECL1P48235 211 aa2.42□□□□□ -2.02
SLX4YLR135W FRA1Q07825 749 aa2.42□□□□□ -2.02
SLX4YLR135W RSC6P25632 483 aa2.41□□□□□ -2.02
SLX4YLR135W HST2P53686 357 aa2.41□□□□□ -2.02
SLX4YLR135W CYC7P00045 113 aa2.4□□□□□ -2.03
SLX4YLR135W KTR1P27810 393 aaKnown RBP2.4□□□□□ -2.03
SLX4YLR135W SAF1P38352 637 aa2.4□□□□□ -2.03
SLX4YLR135W TY1A-DR3Q12441 440 aa2.4□□□□□ -2.03
SLX4YLR135W MMP1Q12372 583 aa2.4□□□□□ -2.03
SLX4YLR135W SEG2P34250 1132 aa2.39□□□□□ -2.03
SLX4YLR135W PKC1P24583 1151 aa2.38□□□□□ -2.03
SLX4YLR135W GLN1P32288 370 aaKnown RBP2.38□□□□□ -2.03
SLX4YLR135W RRM3P38766 723 aa2.38□□□□□ -2.03
SLX4YLR135W YML122CQ03207 126 aa2.38□□□□□ -2.03
SLX4YLR135W ATG20Q07528 640 aa2.38□□□□□ -2.03
SLX4YLR135W HDA2Q06629 674 aa2.38□□□□□ -2.03
SLX4YLR135W NFS1P25374 497 aa2.37□□□□□ -2.03
SLX4YLR135W IRE1P32361 1115 aa2.37□□□□□ -2.03
SLX4YLR135W CSE4P36012 229 aa2.37□□□□□ -2.03
SLX4YLR135W SPO74P45819 413 aa2.37□□□□□ -2.03
SLX4YLR135W DAT1P13483 248 aaKnown RBP2.37□□□□□ -2.03
SLX4YLR135W TBS1P38114 1094 aa2.37□□□□□ -2.03
SLX4YLR135W FIG4P42837 879 aa2.37□□□□□ -2.03
SLX4YLR135W BIM1P40013 344 aa2.36□□□□□ -2.03
SLX4YLR135W TAF1P46677 1066 aa2.36□□□□□ -2.03
SLX4YLR135W GAS5Q08193 484 aa2.36□□□□□ -2.03
SLX4YLR135W WTM2Q12206 467 aa2.36□□□□□ -2.03
SLX4YLR135W RAD59Q12223 238 aa2.36□□□□□ -2.03
SLX4YLR135W TEC1P18412 486 aa2.36□□□□□ -2.03
SLX4YLR135W SPT5P27692 1063 aaKnown RBP2.36□□□□□ -2.03
SLX4YLR135W BIO2P32451 375 aa2.36□□□□□ -2.03
SLX4YLR135W YBL036CP38197 257 aa2.36□□□□□ -2.03
SLX4YLR135W ATG32P40458 529 aa2.36□□□□□ -2.03
SLX4YLR135W YJL007CP47080 104 aa2.36□□□□□ -2.03
SLX4YLR135W TIF1P10081 395 aaKnown RBP2.35□□□□□ -2.03
SLX4YLR135W SSA1P10591 642 aaKnown RBP2.35□□□□□ -2.03
SLX4YLR135W ESS1P22696 170 aa2.35□□□□□ -2.03
SLX4YLR135W SCJ1P25303 377 aa2.35□□□□□ -2.03
SLX4YLR135W RSC30P38781 883 aa2.35□□□□□ -2.03
SLX4YLR135W SPR3P41901 512 aa2.35□□□□□ -2.03
SLX4YLR135W PKH3Q03306 898 aaPredicted RBP2.35□□□□□ -2.03
SLX4YLR135W GAS1P22146 559 aaKnown RBP2.34□□□□□ -2.03
SLX4YLR135W POL12P38121 705 aaPredicted RBP2.34□□□□□ -2.03
SLX4YLR135W MAK16P10962 306 aaPredicted RBP2.34□□□□□ -2.04
SLX4YLR135W SSA4P22202 642 aaKnown RBP2.34□□□□□ -2.04
SLX4YLR135W SIS2P36024 562 aa2.34□□□□□ -2.04
SLX4YLR135W RPL34BP40525 121 aaKnown RBP2.34□□□□□ -2.04
SLX4YLR135W JJJ2P46997 583 aa2.34□□□□□ -2.04
SLX4YLR135W SUB2Q07478 446 aaKnown RBP2.34□□□□□ -2.04
SLX4YLR135W SUP45P12385 437 aaKnown RBP2.33□□□□□ -2.04
SLX4YLR135W YJU3P28321 313 aa2.33□□□□□ -2.04
SLX4YLR135W ARG8P18544 423 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms