RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
USB1YLR132C SLA1P32790 1244 aa7.29□□□□□ -1.24
USB1YLR132C RPL34BP40525 121 aaKnown RBP7.29□□□□□ -1.24
USB1YLR132C TY1A-DR3Q12441 440 aa7.29□□□□□ -1.24
USB1YLR132C TRK2P28584 889 aa7.28□□□□□ -1.24
USB1YLR132C RLF2Q12495 606 aa7.28□□□□□ -1.24
USB1YLR132C SUM1P46676 1062 aa7.27□□□□□ -1.25
USB1YLR132C AIM9P40053 627 aaKnown RBP7.25□□□□□ -1.25
USB1YLR132C UBP15P50101 1230 aa7.25□□□□□ -1.25
USB1YLR132C CUZ1P53899 274 aa7.24□□□□□ -1.25
USB1YLR132C YPR204WQ08995 1032 aa7.24□□□□□ -1.25
USB1YLR132C SWI5P08153 709 aa7.23□□□□□ -1.25
USB1YLR132C PEP12P32854 288 aa7.23□□□□□ -1.25
USB1YLR132C AHP1P38013 176 aaKnown RBP7.23□□□□□ -1.25
USB1YLR132C DPH6Q12429 685 aa7.23□□□□□ -1.25
USB1YLR132C ALA1P40825 983 aaKnown RBP7.22□□□□□ -1.25
USB1YLR132C JJJ2P46997 583 aa7.22□□□□□ -1.25
USB1YLR132C LYS5P50113 272 aa7.22□□□□□ -1.25
USB1YLR132C SHM1P37292 490 aaPredicted RBP7.21□□□□□ -1.26
USB1YLR132C JJJ3P47138 172 aa7.21□□□□□ -1.26
USB1YLR132C YPQ2Q06328 317 aa7.21□□□□□ -1.26
USB1YLR132C RPS6AP0CX37 236 aaKnown RBP7.19□□□□□ -1.26
USB1YLR132C RPS6BP0CX38 236 aaPredicted RBP7.19□□□□□ -1.26
USB1YLR132C PDI1P17967 522 aaKnown RBP7.18□□□□□ -1.26
USB1YLR132C DIT1P21623 536 aa7.18□□□□□ -1.26
USB1YLR132C YFL034WP43564 1073 aa7.18□□□□□ -1.26
USB1YLR132C IRE1P32361 1115 aa7.17□□□□□ -1.26
USB1YLR132C NTH2P35172 780 aa7.17□□□□□ -1.26
USB1YLR132C TSC13Q99190 310 aa7.17□□□□□ -1.26
USB1YLR132C CEM1P39525 442 aa7.16□□□□□ -1.26
USB1YLR132C KTR7P40504 517 aa7.16□□□□□ -1.26
USB1YLR132C YMR265CQ03508 461 aaKnown RBP7.16□□□□□ -1.26
USB1YLR132C RPS31P05759 152 aaKnown RBP7.14□□□□□ -1.27
USB1YLR132C KRE33P53914 1056 aaKnown RBP7.14□□□□□ -1.27
USB1YLR132C SYT1Q06836 1226 aa7.14□□□□□ -1.27
USB1YLR132C PSH1Q12161 406 aa7.14□□□□□ -1.27
USB1YLR132C MCM1P11746 286 aa7.13□□□□□ -1.27
USB1YLR132C PDC6P26263 563 aaKnown RBP7.13□□□□□ -1.27
USB1YLR132C ACS2P52910 683 aaKnown RBP7.13□□□□□ -1.27
USB1YLR132C PHO87P25360 923 aa7.12□□□□□ -1.27
USB1YLR132C SIS2P36024 562 aa7.12□□□□□ -1.27
USB1YLR132C YNL165WP53891 406 aa7.12□□□□□ -1.27
USB1YLR132C YDR461C-AQ2V2P7 80 aa7.12□□□□□ -1.27
USB1YLR132C CYT1P07143 309 aa7.11□□□□□ -1.27
USB1YLR132C ADE12P80210 433 aaKnown RBP7.11□□□□□ -1.27
USB1YLR132C TTI1P36097 1038 aa7.09□□□□□ -1.27
USB1YLR132C HAP4P14064 554 aa7.08□□□□□ -1.28
USB1YLR132C MDJ1P35191 511 aa7.08□□□□□ -1.28
USB1YLR132C MRPL16P38064 232 aa7.08□□□□□ -1.28
USB1YLR132C LEU1P07264 779 aaKnown RBP7.07□□□□□ -1.28
USB1YLR132C GAL2P13181 574 aa7.07□□□□□ -1.28
USB1YLR132C ALD2P47771 506 aa7.07□□□□□ -1.28
USB1YLR132C GAS4Q08271 471 aa7.07□□□□□ -1.28
USB1YLR132C STB3Q12427 513 aa7.07□□□□□ -1.28
USB1YLR132C MLF3P32047 452 aa7.06□□□□□ -1.28
USB1YLR132C ROM1P53046 1155 aa7.06□□□□□ -1.28
USB1YLR132C UBP1P25037 809 aa7.05□□□□□ -1.28
USB1YLR132C TGL4P36165 910 aa7.05□□□□□ -1.28
USB1YLR132C ICP55P40051 511 aa7.05□□□□□ -1.28
USB1YLR132C Q0182Q9ZZW1 134 aa7.05□□□□□ -1.28
USB1YLR132C AI1P03875 834 aa7.04□□□□□ -1.28
USB1YLR132C FPS1P23900 669 aa7.04□□□□□ -1.28
USB1YLR132C SPR3P41901 512 aa7.04□□□□□ -1.28
USB1YLR132C YFL066CP43538 392 aa7.04□□□□□ -1.28
USB1YLR132C MTC5Q03897 1148 aa7.04□□□□□ -1.28
USB1YLR132C YTA6P40328 754 aa7.03□□□□□ -1.28
USB1YLR132C NSG2P53898 299 aa7.03□□□□□ -1.28
USB1YLR132C THI72Q08579 599 aa7.03□□□□□ -1.28
USB1YLR132C PHM7Q12252 991 aa7.02□□□□□ -1.29
USB1YLR132C RGP1P16664 663 aa7.01□□□□□ -1.29
USB1YLR132C CPS1P27614 576 aa7.01□□□□□ -1.29
USB1YLR132C NGR1P32831 672 aaKnown RBP7.01□□□□□ -1.29
USB1YLR132C ECM23Q02710 187 aa7.01□□□□□ -1.29
USB1YLR132C PUS1Q12211 544 aaKnown RBP7.01□□□□□ -1.29
USB1YLR132C GPM1P00950 247 aaKnown RBP7□□□□□ -1.29
USB1YLR132C HXT5P38695 592 aa7□□□□□ -1.29
USB1YLR132C MSC7P38694 644 aa6.98□□□□□ -1.29
USB1YLR132C SBE2P42223 864 aaKnown RBP6.98□□□□□ -1.29
USB1YLR132C TY1A-DR2Q03964 440 aaKnown RBP6.98□□□□□ -1.29
USB1YLR132C UTP4Q06679 776 aaKnown RBP6.98□□□□□ -1.29
USB1YLR132C VAN1P23642 535 aa6.97□□□□□ -1.29
USB1YLR132C SCD5P34758 872 aa6.97□□□□□ -1.29
USB1YLR132C PUP1P25043 261 aa6.96□□□□□ -1.3
USB1YLR132C UBX7P38349 436 aa6.96□□□□□ -1.3
USB1YLR132C MTO1P53070 669 aa6.96□□□□□ -1.3
USB1YLR132C SSA4P22202 642 aaKnown RBP6.95□□□□□ -1.3
USB1YLR132C SUV3P32580 737 aa6.95□□□□□ -1.3
USB1YLR132C PDC5P16467 563 aaKnown RBP6.94□□□□□ -1.3
USB1YLR132C TRS33Q99394 268 aa6.94□□□□□ -1.3
USB1YLR132C RPP1AP05318 106 aaPredicted RBP6.93□□□□□ -1.3
USB1YLR132C KNS1P32350 737 aaPredicted RBP6.93□□□□□ -1.3
USB1YLR132C TDA6Q06466 467 aa6.93□□□□□ -1.3
USB1YLR132C LSB3P43603 459 aaKnown RBP6.92□□□□□ -1.3
USB1YLR132C SKP1P52286 194 aa6.92□□□□□ -1.3
USB1YLR132C YNR014WP53719 212 aa6.92□□□□□ -1.3
USB1YLR132C CAB1Q04430 367 aa6.92□□□□□ -1.3
USB1YLR132C KAP122P32767 1081 aa6.91□□□□□ -1.3
USB1YLR132C CWH41P53008 833 aa6.91□□□□□ -1.3
USB1YLR132C CUS1Q02554 436 aaPredicted RBP6.91□□□□□ -1.3
USB1YLR132C YPR053CQ6Q5F3 151 aa6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms