RNA–Protein interactions for RNA: YLL022C

HIF1, Transcript of Non-essential component of the HAT-B histone acetyltransferase complex, yeast

Gene HIF1, Length 1,158 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIF1	YLL022C	ALE1	Q08548	619 aa		11.51	□□□□□ -0.57
HIF1	YLL022C	COB	P00163	385 aa		11.5	□□□□□ -0.57
HIF1	YLL022C	TRL1	P09880	827 aa	Known RBP	11.5	□□□□□ -0.57
HIF1	YLL022C	GTT3	P39996	337 aa		11.5	□□□□□ -0.57
HIF1	YLL022C	NUP133	P36161	1157 aa		11.49	□□□□□ -0.57
HIF1	YLL022C	DNM1	P54861	757 aa		11.49	□□□□□ -0.57
HIF1	YLL022C	CST6	P40535	587 aa		11.48	□□□□□ -0.57
HIF1	YLL022C	SWI1	P09547	1314 aa		11.47	□□□□□ -0.57
HIF1	YLL022C	YGL081W	P53156	320 aa		11.47	□□□□□ -0.57
HIF1	YLL022C	HST1	P53685	503 aa		11.47	□□□□□ -0.57
HIF1	YLL022C	ATG13	Q06628	738 aa		11.47	□□□□□ -0.57
HIF1	YLL022C	YKR075C	P36155	307 aa		11.46	□□□□□ -0.57
HIF1	YLL022C	CIR1	P42940	261 aa		11.46	□□□□□ -0.57
HIF1	YLL022C	RSC1	P53236	928 aa		11.46	□□□□□ -0.57
HIF1	YLL022C	HRQ1	Q05549	1077 aa		11.46	□□□□□ -0.57
HIF1	YLL022C	BIK1	P11709	440 aa		11.45	□□□□□ -0.58
HIF1	YLL022C	ECM21	P38167	1117 aa	Known RBP	11.45	□□□□□ -0.58
HIF1	YLL022C	NPR2	P39923	615 aa		11.45	□□□□□ -0.58
HIF1	YLL022C	YJR008W	P47085	338 aa		11.45	□□□□□ -0.58
HIF1	YLL022C	ADE16	P54113	591 aa	Known RBP	11.45	□□□□□ -0.58
HIF1	YLL022C	RMD1	Q03441	430 aa		11.45	□□□□□ -0.58
HIF1	YLL022C	LCD1	Q04377	747 aa		11.45	□□□□□ -0.58
HIF1	YLL022C	NCB2	Q92317	146 aa		11.45	□□□□□ -0.58
HIF1	YLL022C	TCB2	P48231	1178 aa		11.44	□□□□□ -0.58
HIF1	YLL022C	PIL1	P53252	339 aa	Known RBP	11.44	□□□□□ -0.58
HIF1	YLL022C	FRK1	Q03002	865 aa	Predicted RBP	11.44	□□□□□ -0.58
HIF1	YLL022C	FPR4	Q06205	392 aa	Predicted RBP	11.44	□□□□□ -0.58
HIF1	YLL022C	OSM1	P21375	501 aa	Known RBP	11.43	□□□□□ -0.58
HIF1	YLL022C	MNN4	P36044	1178 aa		11.43	□□□□□ -0.58
HIF1	YLL022C	UBP12	P39538	1254 aa		11.43	□□□□□ -0.58
HIF1	YLL022C	RIM20	Q12033	661 aa		11.43	□□□□□ -0.58
HIF1	YLL022C	PDR18	P53756	1333 aa		11.42	□□□□□ -0.58
HIF1	YLL022C	LPD1	P09624	499 aa	Known RBP	11.42	□□□□□ -0.58
HIF1	YLL022C	UGA2	P38067	497 aa		11.42	□□□□□ -0.58
HIF1	YLL022C	RKM3	P38222	552 aa		11.42	□□□□□ -0.58
HIF1	YLL022C	RVS167	P39743	482 aa	Known RBP	11.42	□□□□□ -0.58
HIF1	YLL022C	HYR1	P40581	163 aa	Known RBP	11.42	□□□□□ -0.58
HIF1	YLL022C	ALD2	P47771	506 aa		11.42	□□□□□ -0.58
HIF1	YLL022C	CTR9	P89105	1077 aa		11.42	□□□□□ -0.58
HIF1	YLL022C	RPN12	P32496	274 aa		11.41	□□□□□ -0.58
HIF1	YLL022C	AAP1	P37898	856 aa	Known RBP	11.41	□□□□□ -0.58
HIF1	YLL022C	SSF1	P38789	453 aa	Predicted RBP	11.41	□□□□□ -0.58
HIF1	YLL022C	KEX1	P09620	729 aa		11.4	□□□□□ -0.58
HIF1	YLL022C	LYS4	P49367	693 aa	Predicted RBP	11.4	□□□□□ -0.58
HIF1	YLL022C	KRE33	P53914	1056 aa	Known RBP	11.4	□□□□□ -0.58
HIF1	YLL022C	BRE1	Q07457	700 aa	Known RBP	11.4	□□□□□ -0.58
HIF1	YLL022C	GRX1	P25373	110 aa	Known RBP	11.39	□□□□□ -0.59
HIF1	YLL022C	KRI1	P42846	591 aa	Known RBP	11.39	□□□□□ -0.59
HIF1	YLL022C	MRPS35	P53292	345 aa		11.39	□□□□□ -0.59
HIF1	YLL022C	VPS64	Q03944	604 aa		11.39	□□□□□ -0.59
HIF1	YLL022C	MSB4	Q12317	492 aa		11.39	□□□□□ -0.59
HIF1	YLL022C	AIM44	Q99299	758 aa		11.39	□□□□□ -0.59
HIF1	YLL022C	YBL086C	P38177	466 aa		11.38	□□□□□ -0.59
HIF1	YLL022C	AIM9	P40053	627 aa	Known RBP	11.38	□□□□□ -0.59
HIF1	YLL022C	RSM25	P40496	264 aa		11.38	□□□□□ -0.59
HIF1	YLL022C	MLC1	P53141	149 aa		11.38	□□□□□ -0.59
HIF1	YLL022C	YGL242C	P53066	181 aa		11.37	□□□□□ -0.59
HIF1	YLL022C	MDG1	P53885	366 aa		11.37	□□□□□ -0.59
HIF1	YLL022C	RMT2	Q03305	412 aa		11.37	□□□□□ -0.59
HIF1	YLL022C	KTR3	P38130	404 aa	Predicted RBP	11.36	□□□□□ -0.59
HIF1	YLL022C	YBP2	P53169	641 aa		11.36	□□□□□ -0.59
HIF1	YLL022C	ALO1	P54783	526 aa	Known RBP	11.36	□□□□□ -0.59
HIF1	YLL022C	APC11	Q12157	165 aa		11.36	□□□□□ -0.59
HIF1	YLL022C	RPL19A	P0CX82	189 aa	Known RBP	11.35	□□□□□ -0.59
HIF1	YLL022C	RPL19B	P0CX83	189 aa	Predicted RBP	11.35	□□□□□ -0.59
HIF1	YLL022C	SET1	P38827	1080 aa	Known RBP	11.35	□□□□□ -0.59
HIF1	YLL022C	PEX19	Q07418	342 aa		11.35	□□□□□ -0.59
HIF1	YLL022C	BDF1	P35817	686 aa		11.34	□□□□□ -0.59
HIF1	YLL022C	APL2	P36000	726 aa	Predicted RBP	11.34	□□□□□ -0.59
HIF1	YLL022C	HXT10	P43581	546 aa		11.34	□□□□□ -0.59
HIF1	YLL022C	SSA2	P10592	639 aa	Known RBP	11.33	□□□□□ -0.6
HIF1	YLL022C	KTR1	P27810	393 aa	Known RBP	11.33	□□□□□ -0.6
HIF1	YLL022C	NOP53	Q12080	455 aa	Known RBP	11.33	□□□□□ -0.6
HIF1	YLL022C	MCM2	P29469	868 aa		11.32	□□□□□ -0.6
HIF1	YLL022C	DID4	P36108	232 aa		11.32	□□□□□ -0.6
HIF1	YLL022C	CWH41	P53008	833 aa		11.32	□□□□□ -0.6
HIF1	YLL022C	YLR271W	Q06152	274 aa		11.32	□□□□□ -0.6
HIF1	YLL022C	SSP2	Q08646	371 aa		11.32	□□□□□ -0.6
HIF1	YLL022C	YPR204W	Q08995	1032 aa		11.32	□□□□□ -0.6
HIF1	YLL022C	SLA1	P32790	1244 aa		11.31	□□□□□ -0.6
HIF1	YLL022C	MIC60	P36112	540 aa		11.31	□□□□□ -0.6
HIF1	YLL022C	ELM1	P32801	640 aa		11.3	□□□□□ -0.6
HIF1	YLL022C	PRX1	P34227	261 aa	Known RBP	11.3	□□□□□ -0.6
HIF1	YLL022C	SPO22	P40511	975 aa		11.3	□□□□□ -0.6
HIF1	YLL022C	CTH1	P47976	325 aa		11.3	□□□□□ -0.6
HIF1	YLL022C	CTF18	P49956	741 aa		11.3	□□□□□ -0.6
HIF1	YLL022C	PIB2	P53191	635 aa		11.3	□□□□□ -0.6
HIF1	YLL022C	ALD3	P54114	506 aa		11.3	□□□□□ -0.6
HIF1	YLL022C	GRE2	Q12068	342 aa	Known RBP	11.3	□□□□□ -0.6
HIF1	YLL022C	TSR3	Q12094	313 aa	Known RBP	11.3	□□□□□ -0.6
HIF1	YLL022C	MBR1	P23493	339 aa		11.29	□□□□□ -0.6
HIF1	YLL022C	STM1	P39015	273 aa	Known RBP	11.29	□□□□□ -0.6
HIF1	YLL022C	CCT5	P40413	562 aa	Known RBP	11.29	□□□□□ -0.6
HIF1	YLL022C	PEX14	P53112	341 aa		11.29	□□□□□ -0.6
HIF1	YLL022C	PSH1	Q12161	406 aa		11.29	□□□□□ -0.6
HIF1	YLL022C	BUG1	Q12191	341 aa		11.29	□□□□□ -0.6
HIF1	YLL022C	UTP22	P53254	1237 aa	Predicted RBP	11.28	□□□□□ -0.6
HIF1	YLL022C	PKH1	Q03407	766 aa		11.28	□□□□□ -0.6
HIF1	YLL022C	TUM1	Q08686	304 aa	Known RBP	11.28	□□□□□ -0.6
HIF1	YLL022C	SSK22	P25390	1331 aa	Predicted RBP	11.28	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms