RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W IPL1P38991 367 aa3.7□□□□□ -1.82
PHD1YKL043W MVP1P40959 511 aaKnown RBP3.7□□□□□ -1.82
PHD1YKL043W VMR1P38735 1592 aa3.69□□□□□ -1.82
PHD1YKL043W COX6P00427 148 aa3.69□□□□□ -1.82
PHD1YKL043W RNA1P11745 407 aaKnown RBP3.69□□□□□ -1.82
PHD1YKL043W PCT1P13259 424 aa3.69□□□□□ -1.82
PHD1YKL043W MSP1P28737 362 aa3.69□□□□□ -1.82
PHD1YKL043W SPC110P32380 944 aa3.69□□□□□ -1.82
PHD1YKL043W GCD11P32481 527 aaKnown RBP3.69□□□□□ -1.82
PHD1YKL043W NMD2P38798 1089 aaKnown RBP3.69□□□□□ -1.82
PHD1YKL043W PIL1P53252 339 aaKnown RBP3.69□□□□□ -1.82
PHD1YKL043W MAK10Q02197 733 aa3.69□□□□□ -1.82
PHD1YKL043W ERF2Q06551 359 aa3.69□□□□□ -1.82
PHD1YKL043W NUP188P52593 1655 aaKnown RBP3.68□□□□□ -1.82
PHD1YKL043W YRF1-4O13559 1382 aa3.68□□□□□ -1.82
PHD1YKL043W YML133CQ03099 1374 aa3.68□□□□□ -1.82
PHD1YKL043W YLL067CQ07888 1374 aa3.68□□□□□ -1.82
PHD1YKL043W YLL066CQ99208 1374 aa3.68□□□□□ -1.82
PHD1YKL043W RGR1P19263 1082 aa3.68□□□□□ -1.82
PHD1YKL043W TCD1P38756 429 aa3.68□□□□□ -1.82
PHD1YKL043W RPN1P38764 993 aaKnown RBP3.68□□□□□ -1.82
PHD1YKL043W NOP7P53261 605 aaKnown RBP3.68□□□□□ -1.82
PHD1YKL043W CTR9P89105 1077 aa3.68□□□□□ -1.82
PHD1YKL043W YPR109WQ06104 294 aa3.68□□□□□ -1.82
PHD1YKL043W FPR4Q06205 392 aaPredicted RBP3.68□□□□□ -1.82
PHD1YKL043W IML1P47170 1584 aa3.68□□□□□ -1.82
PHD1YKL043W KEX2P13134 814 aa3.67□□□□□ -1.82
PHD1YKL043W MRF1P30775 413 aaPredicted RBP3.67□□□□□ -1.82
PHD1YKL043W RGA1P39083 1007 aa3.67□□□□□ -1.82
PHD1YKL043W RRN7P40992 514 aa3.67□□□□□ -1.82
PHD1YKL043W FRK1Q03002 865 aaPredicted RBP3.67□□□□□ -1.82
PHD1YKL043W LAM6Q08001 693 aa3.67□□□□□ -1.82
PHD1YKL043W ERG12P07277 443 aa3.66□□□□□ -1.82
PHD1YKL043W NAP1P25293 417 aaKnown RBP3.66□□□□□ -1.82
PHD1YKL043W NPL4P33755 580 aa3.66□□□□□ -1.82
PHD1YKL043W ARL1P38116 183 aaKnown RBP3.66□□□□□ -1.82
PHD1YKL043W FUN12P39730 1002 aaKnown RBP3.66□□□□□ -1.82
PHD1YKL043W ENV11P53246 860 aa3.66□□□□□ -1.82
PHD1YKL043W PDS5Q04264 1277 aa3.66□□□□□ -1.82
PHD1YKL043W PDR11P40550 1411 aa3.66□□□□□ -1.82
PHD1YKL043W RAD9P14737 1309 aa3.66□□□□□ -1.82
PHD1YKL043W BYE1P36106 594 aa3.65□□□□□ -1.83
PHD1YKL043W CWC22P53333 577 aaKnown RBP3.65□□□□□ -1.83
PHD1YKL043W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
PHD1YKL043W MAK21Q12176 1025 aaKnown RBP3.65□□□□□ -1.83
PHD1YKL043W RVB2Q12464 471 aaKnown RBP3.65□□□□□ -1.83
PHD1YKL043W NOP14Q99207 810 aaKnown RBP3.65□□□□□ -1.83
PHD1YKL043W MLP1Q02455 1875 aaKnown RBP3.64□□□□□ -1.83
PHD1YKL043W PBS2P08018 668 aa3.64□□□□□ -1.83
PHD1YKL043W LEU3P08638 886 aa3.64□□□□□ -1.83
PHD1YKL043W SRP54P20424 541 aaKnown RBP3.64□□□□□ -1.83
PHD1YKL043W KNS1P32350 737 aaPredicted RBP3.64□□□□□ -1.83
PHD1YKL043W SPT16P32558 1035 aaKnown RBP3.64□□□□□ -1.83
PHD1YKL043W CIN4P39110 191 aa3.64□□□□□ -1.83
PHD1YKL043W BDP1P46678 594 aa3.64□□□□□ -1.83
PHD1YKL043W ESC2Q06340 456 aa3.64□□□□□ -1.83
PHD1YKL043W PAC1P39946 494 aaKnown RBP3.63□□□□□ -1.83
PHD1YKL043W TPM2P40414 161 aa3.63□□□□□ -1.83
PHD1YKL043W MSH4P40965 878 aaPredicted RBP3.63□□□□□ -1.83
PHD1YKL043W YPP1P46951 817 aa3.63□□□□□ -1.83
PHD1YKL043W TEA1P47988 759 aa3.63□□□□□ -1.83
PHD1YKL043W SNF2P22082 1703 aa3.63□□□□□ -1.83
PHD1YKL043W HAP1P0CE41 1502 aa3.63□□□□□ -1.83
PHD1YKL043W BUD27P43573 796 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
PHD1YKL043W VPS4P52917 437 aa3.62□□□□□ -1.83
PHD1YKL043W LCD1Q04377 747 aa3.62□□□□□ -1.83
PHD1YKL043W COG8Q04632 607 aa3.62□□□□□ -1.83
PHD1YKL043W KRE5P22023 1365 aa3.62□□□□□ -1.83
PHD1YKL043W RAV1P47104 1357 aa3.62□□□□□ -1.83
PHD1YKL043W USO1P25386 1790 aa3.61□□□□□ -1.83
PHD1YKL043W SPT2P06843 333 aaPredicted RBP3.61□□□□□ -1.83
PHD1YKL043W SWI3P32591 825 aa3.61□□□□□ -1.83
PHD1YKL043W RKM3P38222 552 aa3.61□□□□□ -1.83
PHD1YKL043W IES2P40154 320 aa3.61□□□□□ -1.83
PHD1YKL043W RAD26P40352 1085 aa3.61□□□□□ -1.83
PHD1YKL043W KRI1P42846 591 aaKnown RBP3.61□□□□□ -1.83
PHD1YKL043W THI12P42883 340 aa3.61□□□□□ -1.83
PHD1YKL043W BRE2P43132 505 aa3.61□□□□□ -1.83
PHD1YKL043W THI5P43534 340 aa3.61□□□□□ -1.83
PHD1YKL043W MRX12P47084 519 aa3.61□□□□□ -1.83
PHD1YKL043W THI11P47183 340 aa3.61□□□□□ -1.83
PHD1YKL043W TAN1P53072 289 aaPredicted RBP3.61□□□□□ -1.83
PHD1YKL043W RNT1Q02555 471 aa3.61□□□□□ -1.83
PHD1YKL043W VPS60Q03390 229 aa3.61□□□□□ -1.83
PHD1YKL043W THI13Q07748 340 aa3.61□□□□□ -1.83
PHD1YKL043W LTV1P34078 463 aa3.6□□□□□ -1.83
PHD1YKL043W DJP1P40564 432 aa3.6□□□□□ -1.83
PHD1YKL043W STU2P46675 888 aa3.6□□□□□ -1.83
PHD1YKL043W KIP3P53086 805 aaKnown RBP3.6□□□□□ -1.83
PHD1YKL043W RIA1P53893 1110 aa3.6□□□□□ -1.83
PHD1YKL043W HOS3Q02959 697 aaKnown RBP3.6□□□□□ -1.83
PHD1YKL043W VPS72Q03388 795 aa3.6□□□□□ -1.83
PHD1YKL043W ECM16Q04217 1267 aaKnown RBP3.6□□□□□ -1.83
PHD1YKL043W AGE1Q04412 482 aa3.6□□□□□ -1.83
PHD1YKL043W CAB1Q04430 367 aa3.6□□□□□ -1.83
PHD1YKL043W RTC1Q08281 1341 aa3.6□□□□□ -1.83
PHD1YKL043W RAD2P07276 1031 aa3.59□□□□□ -1.83
PHD1YKL043W TAF5P38129 798 aa3.59□□□□□ -1.83
PHD1YKL043W DMA1P38823 416 aa3.59□□□□□ -1.83
PHD1YKL043W YNL050CP53952 270 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms