RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C ERF2Q06551 359 aa2.41□□□□□ -2.02
HIR3YJR140C RPS6AP0CX37 236 aaKnown RBP2.41□□□□□ -2.02
HIR3YJR140C RPS6BP0CX38 236 aaPredicted RBP2.41□□□□□ -2.02
HIR3YJR140C PDI1P17967 522 aaKnown RBP2.41□□□□□ -2.02
HIR3YJR140C NTH2P35172 780 aa2.41□□□□□ -2.02
HIR3YJR140C FBP26P32604 452 aa2.41□□□□□ -2.02
HIR3YJR140C QDR1P40475 563 aa2.41□□□□□ -2.02
HIR3YJR140C DAT1P13483 248 aaKnown RBP2.4□□□□□ -2.02
HIR3YJR140C MIP1P15801 1254 aa2.4□□□□□ -2.02
HIR3YJR140C ISF1P32488 338 aa2.4□□□□□ -2.02
HIR3YJR140C NMD2P38798 1089 aaKnown RBP2.4□□□□□ -2.02
HIR3YJR140C PAC1P39946 494 aaKnown RBP2.4□□□□□ -2.02
HIR3YJR140C DOS2P54858 310 aa2.4□□□□□ -2.02
HIR3YJR140C ISU1Q03020 165 aa2.4□□□□□ -2.02
HIR3YJR140C TY1A-DR4O74302 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-HP0C2I4 478 aaKnown RBP2.4□□□□□ -2.03
HIR3YJR140C TY1A-AP0CX57 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-PR1P0CX58 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-ORP0CX59 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-PR2P0CX60 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-DR5P0CX65 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-ER2P0CX66 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-GR3P0CX67 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-LR1P0CX68 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-MR2P0CX69 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-JR2P47099 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-DR1Q03856 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-ML1Q04706 440 aaKnown RBP2.4□□□□□ -2.03
HIR3YJR140C HDA3Q06623 655 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-BRQ12217 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-NL2Q12470 440 aa2.4□□□□□ -2.03
HIR3YJR140C TY1A-GR2Q12485 440 aa2.4□□□□□ -2.03
HIR3YJR140C FIR1P40020 876 aa2.4□□□□□ -2.03
HIR3YJR140C YJR107WP47145 328 aa2.4□□□□□ -2.03
HIR3YJR140C TRL1P09880 827 aaKnown RBP2.39□□□□□ -2.03
HIR3YJR140C SNF7P39929 240 aaKnown RBP2.39□□□□□ -2.03
HIR3YJR140C MAD1P40957 749 aa2.39□□□□□ -2.03
HIR3YJR140C MDJ2P42834 146 aa2.39□□□□□ -2.03
HIR3YJR140C BDS1Q08347 646 aa2.39□□□□□ -2.03
HIR3YJR140C MRT4P33201 236 aaKnown RBP2.39□□□□□ -2.03
HIR3YJR140C NUT2Q06213 157 aa2.39□□□□□ -2.03
HIR3YJR140C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
HIR3YJR140C TAF13P11747 167 aa2.39□□□□□ -2.03
HIR3YJR140C DYS1P38791 387 aa2.39□□□□□ -2.03
HIR3YJR140C IPL1P38991 367 aa2.39□□□□□ -2.03
HIR3YJR140C MOD5P07884 428 aa2.39□□□□□ -2.03
HIR3YJR140C APC11Q12157 165 aa2.39□□□□□ -2.03
HIR3YJR140C STE6P12866 1290 aa2.38□□□□□ -2.03
HIR3YJR140C LDH1P38139 375 aa2.38□□□□□ -2.03
HIR3YJR140C FPR3P38911 411 aaKnown RBP2.38□□□□□ -2.03
HIR3YJR140C CDC55Q00362 526 aa2.38□□□□□ -2.03
HIR3YJR140C RRP15Q06511 250 aaPredicted RBP2.38□□□□□ -2.03
HIR3YJR140C MCD1Q12158 566 aa2.38□□□□□ -2.03
HIR3YJR140C ARG82P07250 355 aa2.38□□□□□ -2.03
HIR3YJR140C SWI5P08153 709 aa2.38□□□□□ -2.03
HIR3YJR140C BOL3P39724 118 aa2.38□□□□□ -2.03
HIR3YJR140C WTM2Q12206 467 aa2.38□□□□□ -2.03
HIR3YJR140C SEC2P17065 759 aa2.38□□□□□ -2.03
HIR3YJR140C HED1Q03937 162 aa2.38□□□□□ -2.03
HIR3YJR140C RRP14P36080 434 aaKnown RBP2.37□□□□□ -2.03
HIR3YJR140C ECM2P38241 364 aaKnown RBP2.37□□□□□ -2.03
HIR3YJR140C ENT3P47160 408 aa2.37□□□□□ -2.03
HIR3YJR140C YGL081WP53156 320 aa2.37□□□□□ -2.03
HIR3YJR140C ISC10P32645 267 aa2.37□□□□□ -2.03
HIR3YJR140C SHU2P38957 223 aa2.37□□□□□ -2.03
HIR3YJR140C YNL011CP53980 444 aa2.37□□□□□ -2.03
HIR3YJR140C SUM1P46676 1062 aa2.37□□□□□ -2.03
HIR3YJR140C OYE2Q03558 400 aaKnown RBP2.37□□□□□ -2.03
HIR3YJR140C NOC3Q07896 663 aaPredicted RBP2.37□□□□□ -2.03
HIR3YJR140C PRE9P23638 258 aaKnown RBP2.37□□□□□ -2.03
HIR3YJR140C AHP1P38013 176 aaKnown RBP2.37□□□□□ -2.03
HIR3YJR140C RSC2Q06488 889 aa2.37□□□□□ -2.03
HIR3YJR140C BRN1P38170 754 aa2.36□□□□□ -2.03
HIR3YJR140C YBR197CP38306 217 aa2.36□□□□□ -2.03
HIR3YJR140C OCA5P38738 679 aa2.36□□□□□ -2.03
HIR3YJR140C YOR131CQ12486 218 aa2.36□□□□□ -2.03
HIR3YJR140C MRPL33P20084 86 aa2.36□□□□□ -2.03
HIR3YJR140C YBL086CP38177 466 aa2.36□□□□□ -2.03
HIR3YJR140C HXT8P40886 569 aa2.36□□□□□ -2.03
HIR3YJR140C YGR122WP53272 402 aa2.36□□□□□ -2.03
HIR3YJR140C BUD31P25337 157 aaPredicted RBP2.36□□□□□ -2.03
HIR3YJR140C UTP14Q04500 899 aaKnown RBP2.36□□□□□ -2.03
HIR3YJR140C AIR2Q12476 344 aaKnown RBP2.36□□□□□ -2.03
HIR3YJR140C MSN5P52918 1224 aa2.36□□□□□ -2.03
HIR3YJR140C FRK1Q03002 865 aaPredicted RBP2.36□□□□□ -2.03
HIR3YJR140C DFG5Q05031 458 aa2.36□□□□□ -2.03
HIR3YJR140C TMA46Q12000 345 aaKnown RBP2.36□□□□□ -2.03
HIR3YJR140C WRS1Q12109 432 aaKnown RBP2.36□□□□□ -2.03
HIR3YJR140C RAD27P26793 382 aa2.35□□□□□ -2.03
HIR3YJR140C SEC8P32855 1065 aa2.35□□□□□ -2.03
HIR3YJR140C IRS4P36115 615 aaKnown RBP2.35□□□□□ -2.03
HIR3YJR140C NTA1P40354 457 aa2.35□□□□□ -2.03
HIR3YJR140C ALA1P40825 983 aaKnown RBP2.35□□□□□ -2.03
HIR3YJR140C MRPS18P42847 217 aa2.35□□□□□ -2.03
HIR3YJR140C YAF9P53930 226 aa2.35□□□□□ -2.03
HIR3YJR140C RSC4Q02206 625 aa2.35□□□□□ -2.03
HIR3YJR140C PHO4P07270 312 aaKnown RBP2.35□□□□□ -2.03
HIR3YJR140C STI1P15705 589 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
HIR3YJR140C RAD55P38953 406 aa2.35□□□□□ -2.03
HIR3YJR140C HAL5P38970 855 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms